AI Article Synopsis
- Transcriptomics is about studying RNA, which tells us how genes work in different cells or organisms.
- Community transcriptomics looks at RNA from different organisms living together to see how they interact.
- This review talks about the new methods to study transcriptomics and how they can help with community transcriptomics, even though there are some challenges in the process.
Article Abstract
Transcriptomics is the study of RNA transcripts, the portion of the genome that is transcribed, in a specific cell, tissue, or organism. Transcriptomics provides insight into gene expression patterns, regulation, and the underlying mechanisms of cellular processes. Community transcriptomics takes this a step further by studying the RNA transcripts from environmental assemblies of organisms, with the intention of better understanding the interactions between members of the community. Community transcriptomics requires successful extraction of RNA from a diverse set of organisms and subsequent analysis via mapping those reads to a reference genome or de novo assembly of the reads. Both, extraction protocols and the analysis steps can pose hurdles for community transcriptomics. This review covers advances in transcriptomic techniques and assesses the viability of applying them to community transcriptomics.
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| http://dx.doi.org/10.1093/bfgp/elae033 | DOI Listing |
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