While Graph Neural Networks (GNNs) have demonstrated their effectiveness in processing non-Euclidean structured data, the neighborhood fetching of GNNs is time-consuming and computationally intensive, making them difficult to deploy in low-latency industrial applications. To address the issue, a feasible solution is graph knowledge distillation (KD), which can learn high-performance student Multi-layer Perceptrons (MLPs) to replace GNNs by mimicking the superior output of teacher GNNs. However, state-of-the-art graph knowledge distillation methods are mainly based on distilling deep features from intermediate hidden layers, this leads to the significance of logit layer distillation being greatly overlooked. To provide a novel viewpoint for studying logits-based KD methods, we introduce the idea of decoupling into graph knowledge distillation. Specifically, we first reformulate the classical graph knowledge distillation loss into two parts, i.e., the target class graph distillation (TCGD) loss and the non-target class graph distillation (NCGD) loss. Next, we decouple the negative correlation between GNN's prediction confidence and NCGD loss, as well as eliminate the fixed weight between TCGD and NCGD. We named this logits-based method Decoupled Graph Knowledge Distillation (DGKD). It can flexibly adjust the weights of TCGD and NCGD for different data samples, thereby improving the prediction accuracy of the student MLP. Extensive experiments conducted on public benchmark datasets show the effectiveness of our method. Additionally, DGKD can be incorporated into any existing graph knowledge distillation framework as a plug-and-play loss function, further improving distillation performance. The code is available at https://github.com/xsk160/DGKD.
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http://dx.doi.org/10.1016/j.neunet.2024.106567 | DOI Listing |
Dev Psychol
January 2025
Adelaide Dental School, University of Adelaide.
Adolescence is a period in which peer problems and emotional symptoms markedly increase in prevalence. However, the causal mechanisms regarding how peer problems cause emotional symptoms at a behavioral level and vice versa remain unknown. To address this gap, the present study investigated the longitudinal network of peer problems and emotional symptoms among Australian adolescents aged 12-14 years.
View Article and Find Full Text PDFPediatr Allergy Immunol
January 2025
Department of Clinical Sciences, Pediatrics, Umeå University, Umeå, Sweden.
Introduction: Diet diversity (DD) in infancy may be protective for early food allergy (FA) but there is limited knowledge about how DD incorporating consumption frequency influences FA risk.
Methods: Three measures of DD were investigated in 2060 infants at 6 and/or at 9 months of age within the NorthPop Birth Cohort Study: a weighted DD score based on intake frequency, the number of introduced foods, and the number of introduced allergenic foods. In multivariable logistic regression models based on directed acyclic graphs, associations to parentally reported physician-diagnosed FA at age 9 and 18 months were estimated, including sensitivity and stratified analyses.
iScience
January 2025
Key Laboratory of Resources Biology and Biotechnology in Western China, Ministry of Education, Provincial Key Laboratory of Biotechnology of Shaanxi Province, the College of Life Sciences, Northwest University, Xi'an 710069, China.
Bacteriophages (phages) are increasingly viewed as a promising alternative for the treatment of antibiotic-resistant bacterial infections. However, the diversity of host ranges complicates the identification of target phages. Existing computational tools often fail to accurately identify phages across different bacterial species.
View Article and Find Full Text PDFBMC Bioinformatics
January 2025
School of Computer Science and Technology, University of Science and Technology of China, 443 Huangshan Road, Hefei, 230027, China.
Background: Drug-drug interactions (DDIs) especially antagonistic ones present significant risks to patient safety, underscoring the urgent need for reliable prediction methods. Recently, substructure-based DDI prediction has garnered much attention due to the dominant influence of functional groups and substructures on drug properties. However, existing approaches face challenges regarding the insufficient interpretability of identified substructures and the isolation of chemical substructures.
View Article and Find Full Text PDFJ Biomed Inform
January 2025
Harvard T.H. Chan School of Public Health, 677 Huntington Ave, Boston, 02115, MA, USA; VA Boston Healthcare System, 150 S Huntington Ave, Boston, 02130, MA, USA. Electronic address:
Objective: Electronic health record (EHR) systems contain a wealth of clinical data stored as both codified data and free-text narrative notes (NLP). The complexity of EHR presents challenges in feature representation, information extraction, and uncertainty quantification. To address these challenges, we proposed an efficient Aggregated naRrative Codified Health (ARCH) records analysis to generate a large-scale knowledge graph (KG) for a comprehensive set of EHR codified and narrative features.
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