The Distal Promoter of the Gene of African Swine Fever Virus Is Responsible for the Transcription of the Alternatively Spliced .

Viruses

State Key Laboratory for Animal Disease Prevention and Control, National African Swine Fever Para-Reference Laboratory, National High-Containment Facilities for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin 150069, China.

Published: June 2024

The B169L protein (pB169L) of African swine fever virus (ASFV) is a structural protein with an unidentified function during the virus replication. The sequences of the gene and the downstream gene are separated by short intergenic regions. However, the regulatory mode of the gene transcription remains unknown. Here, we identified two distinct promoter regions and two transcription start sites (TSSs) located upstream of the open reading frame (ORF) of . Using the promoter reporter system, we demonstrated that the cis activity of the ORF proximal promoter exhibited significantly higher levels compared with that of the distal promoter located in the gene. Furthermore, transfection with the plasmids with two different promoters for could initiate the transcription and expression of the gene in HEK293T cells, and the cis activity of the ORF proximal promoter also displayed higher activities compared with the distal promoter. Interestingly, the distal promoter also initiated the transcription of the alternatively spliced mRNA ( mRNA2) encoding a truncated pB169L (tpB169L) (amino acids 92-169), and the gene transcription efficiency was increased upon mutation of the initiation codon located upstream of the alternatively spliced gene. Taken together, we demonstrated that the distal promoter of gene initiates the transcription of both the mRNA and mRNA2. Comprehensive analysis of the transcriptional regulatory mode of the gene is beneficial for the understanding of the association of B438L protein and pB169L and the construction of the gene-deleted ASFV.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11281499PMC
http://dx.doi.org/10.3390/v16071058DOI Listing

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