Significance: Hyperspectral imaging (HSI) of murine tumor models grown in dorsal skinfold window chambers (DSWCs) offers invaluable insight into the tumor microenvironment. However, light loss in a glass coverslip is often overlooked, and particular tissue characteristics are improperly modeled, leading to errors in tissue properties extracted from hyperspectral images.
Aim: We highlight the significance of spectral renormalization in HSI of DSWC models and demonstrate the benefit of incorporating enhanced green fluorescent protein (EGFP) excitation and emission in the skin tissue model for tumors expressing genes to produce EGFP.
Approach: We employed an HSI system for intravital imaging of mice with 4T1 mammary carcinoma in a DSWC over 14 days. We performed spectral renormalization of hyperspectral images based on the measured reflectance spectra of glass coverslips and utilized an inverse adding-doubling (IAD) algorithm with a two-layer murine skin model, to extract tissue parameters, such as total hemoglobin concentration and tissue oxygenation ( ). The model was upgraded to consider EGFP fluorescence excitation and emission. Moreover, we conducted additional experiments involving tissue phantoms, human forearm skin imaging, and numerical simulations.
Results: Hyperspectral image renormalization and the addition of EGFP fluorescence in the murine skin model reduced the mean absolute percentage errors (MAPEs) of fitted and measured spectra by up to 10% in tissue phantoms, 0.55% to 1.5% in the human forearm experiment and numerical simulations, and up to 0.7% in 4T1 tumors. Similarly, the MAPEs for tissue parameters extracted by IAD were reduced by up to 3% in human forearms and numerical simulations. For some parameters, statistically significant differences ( ) were observed in 4T1 tumors. Ultimately, we have shown that fluorescence emission could be helpful for 4T1 tumor segmentation.
Conclusions: The results contribute to improving intravital monitoring of DWSC models using HSI and pave the way for more accurate and precise quantitative imaging.
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http://dx.doi.org/10.1117/1.JBO.29.9.093504 | DOI Listing |
Phys Rev E
November 2024
Universidad Nacional de Mar del Plata, 7600 Mar del Plata, Buenos Aires, Argentina.
We analytically study the dynamic behavior of a linear mechanical energy harvester nonlinearly coupled to a linear oscillating mode, driven by stochastic Gaussian forces. Using renormalization theory and Feynman diagrams, we determine the renormalization of three key system parameters: the natural frequencies of the oscillating components and the parameter associated with the driving force amplitude. Our results show that random forces can induce the well-known internal resonance state, where the renormalized quantities exhibit a nontrivial dependence on the working frequency.
View Article and Find Full Text PDFPhys Rev Lett
November 2024
Department of Physics, Cornell University, Ithaca, New York 14853, USA.
Few layers of graphene at small twist angles have emerged as a fascinating platform for studying the problem of strong interactions in regimes with a nearly quenched single-particle kinetic energy and nontrivial band topology. Starting from the strong-coupling limit of twisted bilayer graphene with a vanishing single-electron bandwidth and interlayer tunneling between the same sublattice sites, we present an exact analytical theory of the Coulomb interaction-induced low-energy optical spectral weight at all integer fillings. In this limit, while the interaction-induced single-particle dispersion is finite, the optical spectral weight vanishes identically at integer fillings.
View Article and Find Full Text PDFSoft Matter
December 2024
Department of Physics, Emory University, Atlanta, Georgia 30322, USA.
The properties of tissue interfaces - between separate populations of cells, or between a group of cells and its environment - has attracted intense theoretical, computational, and experimental study. Recent work on shape-based models inspired by dense epithelia have suggested a possible "topological sharpening" effect, by which four-fold vertices spatially coordinated along a cellular interface lead to a cusp-like restoring force acting on cells at the interface, which in turn greatly suppresses interfacial fluctuations. We revisit these interfacial fluctuations, focusing on the distinction between short length scale reduction of interfacial fluctuations and long length scale renormalized surface tension.
View Article and Find Full Text PDFPhys Rev Lett
November 2024
Department of Applied Physics and Materials Science, and Department of Physics, California Institute of Technology, Pasadena, California 91125, USA.
The spectral and transport properties of strongly correlated metals, such as SrVO_{3} (SVO), are widely attributed to electron-electron (e-e) interactions, with lattice vibrations (phonons) playing a secondary role. Here, using first-principles electron-phonon (e-ph) and dynamical mean field theory calculations, we show that e-ph interactions play an essential role in SVO: they govern the electron scattering and resistivity in a wide temperature range down to 30 K, and induce an experimentally observed kink in the spectral function. In contrast, the e-e interactions control quasiparticle renormalization and low temperature transport, and enhance the e-ph coupling.
View Article and Find Full Text PDFSci Rep
August 2024
Institute of Spintronics and Quantum Information, Faculty of Physics, Adam Mickiewicz University, ul. Uniwersytetu Poznańskiego 2, 61-614, Poznań, Poland.
In this work we investigate the spin-dependent transport through a double quantum dot embedded in a ferromagnetic tunnel junction and side attached to a topological superconducting nanowire hosting Majorana zero-energy modes. We focus on the transport regime when the Majorana mode leaks into the double quantum dot competing with the two-stage Kondo effect and the ferromagnetic-contact-induced exchange field. In particular, we determine the system's spectral properties and analyze the temperature dependence of the spin-resolved linear conductance by means of the numerical renormalization group method.
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