Cas1 mediates the interference stage in a phage-encoded CRISPR-Cas system.

Nat Chem Biol

Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing Key Laboratory of Bioprocess, State Key Laboratory of Chemical Resource Engineering, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, China.

Published: November 2024

AI Article Synopsis

  • CRISPR-Cas systems are immune defenses in bacteria that protect against viruses and genetic elements; certain viruses, like ICP1, also have their own CRISPR-Cas systems to fight back.* -
  • The ICP1 virus's Cas8f protein is missing a crucial domain for DNA cleavage, which raised questions about how it manages to interfere with host defenses.* -
  • Research uncovered that Cas1, typically involved in adaptation, also plays a key role in DNA targeting during the interference stage by linking other proteins to the DNA, providing new insights into phage CRISPR mechanisms.*

Article Abstract

Clustered regularly interspaced short palindromic repeats (CRISPR)-Cas systems are prokaryotic adaptive immune systems against invading phages and other mobile genetic elements. Notably, some phages, including the Vibrio cholerae-infecting ICP1 (International Center for Diarrheal Disease Research, Bangladesh cholera phage 1), harbor CRISPR-Cas systems to counteract host defenses. Nevertheless, ICP1 Cas8f lacks the helical bundle domain essential for recruitment of helicase-nuclease Cas2/3 during target DNA cleavage and how this system accomplishes the interference stage remains unknown. Here, we found that Cas1, a highly conserved component known to exclusively work in the adaptation stage, also mediates the interference stage through connecting Cas2/3 to the DNA-bound CRISPR-associated complex for antiviral defense (Cascade; CRISPR system yersinia, Csy) of the ICP1 CRISPR-Cas system. A series of structures of Csy, Csy-dsDNA (double-stranded DNA), Cas1-Cas2/3 and Csy-dsDNA-Cas1-Cas2/3 complexes reveal the whole process of Cas1-mediated target DNA cleavage by the ICP1 CRISPR-Cas system. Together, these data support an unprecedented model in which Cas1 mediates the interference stage in a phage-encoded CRISPR-Cas system and the study also sheds light on a unique model of primed adaptation.

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Source
http://dx.doi.org/10.1038/s41589-024-01659-5DOI Listing

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