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25 years of the IPD-IMGT/HLA Database. | LitMetric

25 years of the IPD-IMGT/HLA Database.

HLA

Anthony Nolan Research Institute, Royal Free Hospital, London, UK.

Published: June 2024

AI Article Synopsis

  • The IMGT/HLA Database, established in 1998 by the HLA Informatics Group, serves as a key repository for HLA allele variant sequences recognized by the WHO.
  • The rise of next generation sequencing (NGS) has led to a significant increase in both the volume and complexity of data submitted to the database, enhancing HLA typing capabilities.
  • To keep up with these advancements and the growing user base, the IPD-IMGT/HLA Database has had to innovate its data access and presentation methods while ensuring high standards of curation.

Article Abstract

Twenty-five years ago, in 1998, the HLA Informatics Group of the Anthony Nolan Research Institute released the IMGT/HLA Database. Since this time, this online resource has acted as the repository for the numerous variant sequences of HLA alleles named by the WHO Nomenclature Committee for Factors of the HLA System. The IPD-IMGT/HLA Database has provided a stable, highly accessible, user-friendly repository for this work. During this time, the technology underlying HLA typing has undergone significant changes. Next generation sequencing (NGS) has superseded previous methodologies of HLA typing and can generate large amounts of high-resolution sequencing data. This has resulted in a drastic increase in the number and complexity of sequences submitted to the database. The challenge for the IPD-IMGT/HLA Database has been to maintain the highest standards of curation, while supporting the core set of tools and functionality to our users with increased numbers of submissions and sequences. Traditional methods of accessing and presenting data have been challenged and new methods utilising new computing technologies have had to be developed to keep pace and support a shifting user demographic.

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Source
http://dx.doi.org/10.1111/tan.15549DOI Listing

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