Bioinformatic Identification of TP53 Gene Mutation Hotspots in Colorectal Cancer.

Int J Mol Sci

Department of Pathology, "George Emil Palade" University of Medicine, Pharmacy, Science and Technology of Targu Mures, 540139 Targu Mures, Romania.

Published: June 2024

AI Article Synopsis

  • Mutations in the TP53 gene are commonly found in various cancers, particularly in colorectal carcinoma.
  • The study utilized bioinformatics to identify mutation hotspots in the TP53 gene by comparing sequences from 50 healthy individuals to those from 50 patients with colon cancer.
  • Findings showed that the most frequent mutations were in exons 5 and 8, indicating an uneven distribution of mutations, and underscoring that not all structural changes in the gene lead to increased cancer susceptibility, highlighting a multifactorial approach to cancer pathology.

Article Abstract

Mutations and inactivation of the TP53 gene are frequently observed in various types of malignancies. Precise knowledge of the genetic structure and detection of mutation hotspots are crucial, as these indicate a high probability of developing cancer. The aim of our study was to perform the bioinformatic detection of mutation hotspots in the TP53 gene in patients diagnosed with malignant colon neoplasms using self-developed software (version 1). We compared TP53 gene sequences from 50 healthy individuals with those from 50 patients diagnosed with colorectal carcinoma. Of the 50 samples from cancer patients, the most frequent mutations were observed in exons 5 and 8 (12 mutations per exon) and gene sequences of 12 samples, which differed from those of the 50 samples from healthy individuals. Based on our results, the distribution of mutations in the TP53 gene structure was not even across different exons. By comparing the gene sequences of healthy individuals with those of colon cancer samples, we conclude that structural changes occurring in similar gene regions are not associated with increases in susceptibility to malignancies in every case, namely, that the pathological mechanism is multifactorial.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11203433PMC
http://dx.doi.org/10.3390/ijms25126612DOI Listing

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