A Gram-stain-positive, rod-shaped, aerobic, motile bacterium, J379, was isolated from radioactive water spring C1, located in a former silver-uranium mine in the Czech Republic. This slow-growing strain exhibited optimal growth at 24-28 °C on solid media with <1 % salt concentration and alkaline pH 8-10. The only respiratory quinone found in strain J379 was MK-7(H). C ω9 (60.9 %), C (9.4 %), C and alcohol-C (both 6.2 %) were found to be the major fatty acids. The peptidoglycan contained directly cross-linked -diaminopimelic acid. Phylogenetic reconstruction based on the 16S rRNA gene sequences and the core-genome analysis revealed that strain J379 forms a separate phylogenetic lineage within the recently amended order . A comparison of the 16S rRNA gene sequences between strain J379 and other members of the order showed <96 % similarity. This analysis revealed that the closest type strains were D16/0 /H6 (95.2 %), 0166_1 (94.9 %) and KV-962 (94.5 %). Whole-genome analysis showed that the closest type strain was BR7-21 with an average nucleotide identity of 78 %, average amino acid identity of 63.2 % and percentage of conserved proteins of 48.2 %. The G+C content of the J379 genomic DNA was 71.7 mol%. Based on the phylogenetic and phylogenomic data, as well as its physiological characteristics, strain J379 is proposed to represent a type strain (DSM 113746=CCM 9300) of gen. nov. sp. nov. within the family .
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1099/ijsem.0.006432 | DOI Listing |
Int J Syst Evol Microbiol
June 2024
Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic.
A Gram-stain-positive, rod-shaped, aerobic, motile bacterium, J379, was isolated from radioactive water spring C1, located in a former silver-uranium mine in the Czech Republic. This slow-growing strain exhibited optimal growth at 24-28 °C on solid media with <1 % salt concentration and alkaline pH 8-10. The only respiratory quinone found in strain J379 was MK-7(H).
View Article and Find Full Text PDFMicrobiol Spectr
October 2022
University of Chemistry and Technology, Prague, Faculty of Food and Biochemical Technology, Department of Biochemistry and Microbiology, Prague, Czech Republic.
Balneotherapeutic water springs, such as those with thermal, saline, sulfur, or any other characteristics, have recently been the subject of phylogenetic studies with a closer focus on the description and/or isolation of phylogenetically novel or biotechnologically interesting microorganisms. Generally, however, most such microorganisms are rarely obtained in pure culture or are even, for now, unculturable under laboratory conditions. In this culture-dependent study of radioactive water springs of Jáchymov (Joachimstahl), Czech Republic, we investigated a combination of classical cultivation approaches with those imitating sampling source conditions.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!