The first registered Itoh hybrid cv. Hexie in China is a naturally occurring intersectional hybrid of Sect. and Sect. . In this study, we sequenced, assembled, and analyzed the complete chloroplast genome of Itoh hybrid cv. Hexie. The result showed that the chloroplast genome of Hexie, with a typical circular tetrad structure, is 152,958 bp in length, comprising a large single copy (LSC) region of 84,613 bp, a small single copy (SSC) region of 17,051 bp, and two reverse complementary sequences (IRs) of 25,647 bp. The chloroplast genome encoded 116 genes, including 80 protein-coding genes, 32 tRNA genes, and 4 rRNA genes. Phylogenetic analysis inferred from the shared protein-coding genes showed that the Itoh hybrid cv. Hexie had the closest phylogenetic relationship with , followed by , indicating that was its maternal parent. This study provides a molecular resource for phylogenetic and maternal parent studies of Itoh hybrid, contributing to a basis for Itoh hybrid breeding strategies in the future.
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http://dx.doi.org/10.1080/23802359.2024.2368214 | DOI Listing |
Tomography
December 2024
Department of Diagnostic Radiology, Kitasato University School of Medicine, Sagamihara 252-0374, Japan.
Objectives: We evaluated the noise reduction effects of deep learning reconstruction (DLR) and hybrid iterative reconstruction (HIR) in brain computed tomography (CT).
Methods: CT images of a 16 cm dosimetry phantom, a head phantom, and the brains of 11 patients were reconstructed using filtered backprojection (FBP) and various levels of DLR and HIR. The slice thickness was 5, 2.
Methods Mol Biol
November 2024
Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.
The analysis of the spatial expression patterns of genes is important for deciphering their functions. In situ hybridization provides insight into gene expression patterns at the cellular level. Here we describe a procedure for performing in situ hybridization on sections of paraffin-embedded tissue, including synthesis of labeled RNA probes, hybridization of the probes with target mRNAs, and immunological detection of the signals.
View Article and Find Full Text PDFGenetics
November 2024
Faculty of Applied Biology, Kyoto Institute of Technology, Matsugasaki Goshokaido-cho, Sakyo-ku, Kyoto 606-8585, Japan.
Sexual selection drives rapid evolution of morphological, physiological, and behavioral traits, especially in males, and it may also drive the rapid evolution of hybrid male sterility. Indeed, the faster male theory of speciation was once viewed as a major cause of Haldane's rule in male-heterogametic XY taxa, but is increasingly being replaced by the genetic conflict hypothesis partly because it cannot explain the faster evolution of hybrid female sterility in female-heterogametic ZW taxa. The theory nonetheless predicts that there should be more genes for hybrid male sterility than for hybrid female sterility even in such taxa, but this remains untested.
View Article and Find Full Text PDFPlant Physiol
November 2024
National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China.
Hybrid breeding between herbaceous peonies (the maternal parent) and tree peonies (the paternal parent) results in Paeonia Itoh hybrids (Itoh peonies), a triploid species that combines advantageous traits from both parental species, thus offering great economic value. However, the exact genetic contribution of the two parents is unclear. In this study, we introduce a straightforward approach utilizing heterozygous single-nucleotide polymorphisms (SNPs) and Sanger sequencing of targeted gene fragments to trace the original bases back to their parents in Itoh peonies.
View Article and Find Full Text PDFChem Pharm Bull (Tokyo)
June 2024
Graduate School of Medical Science, Kyoto Prefectural University of Medicine.
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