A deep learning-based model for detecting Leishmania amastigotes in microscopic slides: a new approach to telemedicine.

BMC Infect Dis

Iranian National Registry Center for Lophomoniasis and Toxoplasmosis, Imam Khomeini Hospital, Mazandaran University of Medical Sciences, P. O box, Sari, 48166-33131, Iran.

Published: June 2024

AI Article Synopsis

  • Leishmaniasis is a deadly disease caused by protozoa, and traditional detection methods are slow and prone to errors, prompting the need for a more efficient solution.
  • The study introduces LeishFuNet, a deep learning framework for detecting Leishmania parasites in microscopy images, using transfer learning from models trained on COVID-19 data, along with fine-tuning on a new dataset of 292 images.
  • The model achieved high diagnostic performance metrics, including 98.95% accuracy and 100% sensitivity, showcasing the potential of deep learning to improve leishmaniasis diagnosis over current methods.

Article Abstract

Background: Leishmaniasis, an illness caused by protozoa, accounts for a substantial number of human fatalities globally, thereby emerging as one of the most fatal parasitic diseases. The conventional methods employed for detecting the Leishmania parasite through microscopy are not only time-consuming but also susceptible to errors. Therefore, the main objective of this study is to develop a model based on deep learning, a subfield of artificial intelligence, that could facilitate automated diagnosis of leishmaniasis.

Methods: In this research, we introduce LeishFuNet, a deep learning framework designed for detecting Leishmania parasites in microscopic images. To enhance the performance of our model through same-domain transfer learning, we initially train four distinct models: VGG19, ResNet50, MobileNetV2, and DenseNet 169 on a dataset related to another infectious disease, COVID-19. These trained models are then utilized as new pre-trained models and fine-tuned on a set of 292 self-collected high-resolution microscopic images, consisting of 138 positive cases and 154 negative cases. The final prediction is generated through the fusion of information analyzed by these pre-trained models. Grad-CAM, an explainable artificial intelligence technique, is implemented to demonstrate the model's interpretability.

Results: The final results of utilizing our model for detecting amastigotes in microscopic images are as follows: accuracy of 98.95 1.4%, specificity of 98 2.67%, sensitivity of 100%, precision of 97.91 2.77%, F1-score of 98.92 1.43%, and Area Under Receiver Operating Characteristic Curve of 99 1.33.

Conclusion: The newly devised system is precise, swift, user-friendly, and economical, thus indicating the potential of deep learning as a substitute for the prevailing leishmanial diagnostic techniques.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11144338PMC
http://dx.doi.org/10.1186/s12879-024-09428-4DOI Listing

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