Hypoxia-induced downregulation of RNA mA protein machinery in the naked mole-rat heart.

Biochimie

Affiliation: Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa, Ontario, Canada, K1S 5B6.

Published: October 2024

Naked mole-rats, Heterocephalus glaber, are champion hypoxia-tolerant rodents that live under low oxygen conditions in their subterranean burrows. Detrimental effects of low oxygen can be mitigated through metabolic rate depression (MRD), metabolic reorganization, and global downregulation of nonessential cellular processes. Recent research has progressively implicated epigenetic modifications - rapid, reversible changes to gene expression that do not alter the DNA sequence itself - as major players in implementing and maintaining MRD. N-adenosine (mA) methylation is the most prevalent mammalian RNA modification and is responsible for pre-mRNA processing and mRNA export from the nucleus. Hence, mA -mediated conformational changes alter the cellular fate of transcripts. The present study investigated the role of mA RNA methylation responses to 24 h of hypoxia exposure in H. glaber cardiac tissue. Total protein levels of mA writers/readers/erasers, mA demethylase activity, and total mA quantification were measured under normoxic vs. hypoxic conditions in H. glaber heart. While there was no change in either demethylase activity or total mA content, many proteins of the mA pathway were downregulated during hypoxia. Overall, mA may not be a signature hypoxia-responsive characteristic in H. glaber heart, but downregulation of the protein machinery involved in mA cycling points to an alternate biological involvement. Further research will explore other forms of RNA modifications and other epigenetic mechanisms to determine the controls on hypoxia endurance in this subterranean mammal.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.biochi.2024.05.017DOI Listing

Publication Analysis

Top Keywords

protein machinery
8
low oxygen
8
demethylase activity
8
activity total
8
h glaber heart
8
hypoxia-induced downregulation
4
rna
4
downregulation rna
4
rna protein
4
machinery naked
4

Similar Publications

Studies on the mechanisms and regulation of functional assemblies of SNARE proteins mediating membrane fusion essentially make use of recombinant proteins and artificial phospholipid bilayers. We have developed an easy-to-use in vivo system reconstituting membrane fusion in living bacteria. It relies on the formation of caveolin-dependent intracytoplasmic cisternae followed by the controlled synthesis of members of the synaptic SNARE machinery.

View Article and Find Full Text PDF

Assays of Platelet SNARE-actin Interactions.

Methods Mol Biol

January 2025

Division of Hemostasis and Thrombosis, Department of Medicine, BIDMC, Harvard Medical School, Boston, MA, USA.

The actin cytoskeleton serves an important, but poorly characterized, role in controlling granule exocytosis. The dynamic nature of actin remodeling allows it to act both as a barrier to prevent indiscriminate granule release and as a facilitator of membrane fusion. In its capacity to promote exocytosis, filamentous actin binds to components of the exocytotic machinery through actin binding proteins, but also through direct interactions with SNAREs.

View Article and Find Full Text PDF

The present study was designed to highlight the ameliorative role of iron nanoparticles (FeNPs) against drought stress in spinach (Spinacia oleracea L.) plants. A pot experiment was performed in two-way completely randomize design with three replicates.

View Article and Find Full Text PDF

NUCLEAR RNA-BINDING PROTEINS MEET CYTOPLASMIC VIRUSES.

RNA

January 2025

MRC University of Glasgow Centre for Virus Research, University of Glasgow.

Cytoplasmic viruses interact intricately with the nuclear pore complex and nuclear import/export machineries, affecting nuclear-cytoplasmic trafficking. This can lead to the selective accumulation of nuclear RNA-binding proteins (RBPs) in the cytoplasm. Pioneering research has shown that relocated RBPs serve as an intrinsic defence mechanism against viruses, which involves RNA export, splicing and nucleolar factors.

View Article and Find Full Text PDF

HN1 Functions in Protein Synthesis Regulation via mTOR-RPS6 Axis and Maintains Nucleolar Integrity.

Cell Prolif

January 2025

Faculty of Engineering, Department of Bioengineering, Cancer Biology Laboratory, Ege University, Bornova, Izmir, Turkey.

Haematological and Neurological Expressed 1 (HN1) is an oncogene for various cancers and previously has been linked with centrosome clustering and cell cycle pathways. Moreover, HN1 has recently been reported to activate mTOR signalling, which is the regulator of ribosome biogenesis and maintenance. We explored the role of HN1 in mTOR signalling through various gain- and loss-of-function experiments using biochemical approaches in different cell lines.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!