AI Article Synopsis

  • Breast cancer leads to high mortality rates among women globally, prompting research on plasma sample methylation to discover potential biomarkers for early detection and prognosis.
  • Using various techniques like quantitative methylation-specific PCR and RNA sequencing, the study identified significant hypermethylation in breast cancer tissues, correlating it with poor survival outcomes and advanced cancer stages.
  • The findings suggest that hypermethylation in blood can act as a noninvasive biomarker, and therapies targeting specific genes like SRCIN1 may improve treatment strategies for breast cancer patients.

Article Abstract

Breast cancer is a leading cause of cancer mortality in women worldwide. Using the Infinium MethylationEPIC BeadChip, we analyzed plasma sample methylation to identify the gene in breast cancer patients. We assessed -related roles and pathways for their biomarker potential. To verify the methylation status, quantitative methylation-specific PCR (qMSP) was performed on genomic DNA and circulating cell-free DNA samples, and mRNA expression analysis was performed using RT‒qPCR. The results were validated in a Western population; for this analysis, the samples included plasma samples from breast cancer patients from the USA and from The Cancer Genome Atlas (TCGA) cohort. To study the pathway, we conducted cell viability assays, gene manipulation and RNA sequencing. hypermethylation was identified in 61.8% of breast cancer tissues from Taiwanese patients, exhibiting specificity to this malignancy. Furthermore, its presence correlated significantly with unfavorable 5-year overall survival outcomes. The levels of methylated in the blood of patients from Taiwan and the USA correlated with the stage of breast cancer. The proportion of patients with high methylation levels increased from 0% in healthy individuals to 63.6% in Stage 0, 80% in Stage I and 82.6% in Stage II, with a sensitivity of 78.5%, an accuracy of 90.3% and a specificity of 100%. hypermethylation was significantly correlated with increased mRNA expression ( < 0.001). Knockdown of SRCIN1 decreased the viability of breast cancer cells. silencing resulted in the downregulation of ESR1, BCL2 and various cyclin protein expressions. hypermethylation in the blood may serve as a noninvasive biomarker, facilitating early detection and prognosis evaluation, and -targeted therapies could be used in combination regimens for breast cancer patients.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11118508PMC
http://dx.doi.org/10.3390/biom14050571DOI Listing

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