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A real-time biochemical assay for quantitative analyses of APOBEC-catalyzed DNA deamination. | LitMetric

AI Article Synopsis

  • - Over the last ten years, researchers have recognized a link between APOBEC3 enzymes and cancer mutations, highlighting the need for tools to find inhibitors of these enzymes.
  • - The team developed a new assay called RADD (Real-time APOBEC3-mediated DNA Deamination) that allows for quick setup and real-time fluorescent monitoring of enzyme activity, providing valuable insights into its kinetics.
  • - This assay enhances the current methods for studying APOBEC3 enzymes and can easily be scaled up for high-throughput screening to discover new inhibitors.

Article Abstract

Over the past decade, the connection between APOBEC3 cytosine deaminases and cancer mutagenesis has become increasingly apparent. This growing awareness has created a need for biochemical tools that can be used to identify and characterize potential inhibitors of this enzyme family. In response to this challenge, we have developed a Real-time APOBEC3-mediated DNA Deamination (RADD) assay. This assay offers a single-step set-up and real-time fluorescent read-out, and it is capable of providing insights into enzyme kinetics and also offering a high-sensitivity and easily scalable method for identifying APOBEC3 inhibitors. This assay serves as a crucial addition to the existing APOBEC3 biochemical and cellular toolkit and possesses the versatility to be readily adapted into a high-throughput format for inhibitor discovery.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11100776PMC
http://dx.doi.org/10.1101/2024.05.11.593688DOI Listing

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