The standard approach to variance component estimation in linear mixed models for alpha designs is the residual maximum likelihood (REML) method. One drawback of the REML method in the context of incomplete block designs is that the block variance may be estimated as zero, which can compromise the recovery of inter-block information and hence reduce the accuracy of treatment effects estimation. Due to the development of statistical and computational methods, there is an increasing interest in adopting hierarchical approaches to analysis. In order to increase the precision of the analysis of individual trials laid out as alpha designs, we here make a proposal to create an objectively informed prior distribution for variance components for replicates, blocks and plots, based on the results of previous (historical) trials. We propose different modelling approaches for the prior distributions and evaluate the effectiveness of the hierarchical approach compared to the REML method, which is classically used for analysing individual trials in two-stage approaches for multi-environment trials.
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http://dx.doi.org/10.1007/s00122-024-04639-4 | DOI Listing |
MethodsX
June 2025
Department of Statistics, Faculty of Science and Data Analytics, Institut Teknologi Sepuluh Nopember, Surabaya 60111, Indonesia.
This article proposed a simultaneous equation model for small area estimation with random area and time-varying effects called the Simultaneous Equation Rao-Yu (SERY) model. In the context of small area estimation, many socioeconomic variables are likely to exhibit not only correlations but also causal relationships. Therefore, it is considered to use simultaneous equation model for indirect estimation method in a small-area.
View Article and Find Full Text PDFAnimals (Basel)
December 2024
Network Center for Animal Breeding and Omics Research, Khon Kaen University, Khon Kaen 40002, Thailand.
The objective of this study was to estimate genetic parameters and genetic correlations between growth characteristics and purine and uric acid in the breast and liver and superoxide dismutase (SOD) in the blood. The growth characteristics included body weight (BW) at hatching (BW0), BW at 2, 4, 6, 8, and 10 weeks of age, average daily gain (ADG) at 0-2, 2-4, 4-6, 6-8, and 8-10 weeks of age, and breast circumference at 6, 8, and 10 weeks of age (BrC6, BrC8, and BrC10) were recorded from 300 Thai native chickens (Shee breed). In total, 30 chickens (15 males and 15 females) were randomly euthanized to collect breast meat, liver, and blood samples to determine the purine content.
View Article and Find Full Text PDFJ Adv Periodontol Implant Dent
July 2024
Department of Periodontics, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Background: The purpose of this study was to review the literature on the efficacy of different surgical regenerative methods for peri-implantitis treatment.
Methods: A preliminary search was conducted in seven electronic databases. The studies included in the analysis implemented surgical regenerative treatment in at least one study group.
Sci Rep
December 2024
Limagrain Brazil S.A., Jataí, Goiás, Brazil.
This study investigates the effectiveness of high-throughput phenotyping (HTP) using RGB images from unmanned aerial vehicles (UAVs) to assess vegetation indices (VIs) in different soybean pure lines. The VIs were accessed at various stages of crop development and correlated with agronomic performance traits. The field research was conducted in the experimental area of the Mato Grosso do Sul Foundation, Brazil, with 60 soybean pure lines.
View Article and Find Full Text PDFInt Urogynecol J
November 2024
Department of Obstetrics and Gynecology and Urology, New York Medical College, Valhalla, NY, USA.
Introduction And Hypothesis: Pudendal neuralgia is chronic pelvic pain associated with the pudendal nerve. Unfortunately, the best treatment approach is unknown. Our objective was to systematically assess interventions for pudendal neuralgia for improvement in pain.
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