Fast collective motions are widely present in biomolecules, but their functional relevance remains unclear. Herein, we reveal that fast collective motions of backbone are critical to the water transfer of aquaporin Z (AqpZ) by using solid-state nuclear magnetic resonance (ssNMR) spectroscopy and molecular dynamics (MD) simulations. A total of 212 residue site-specific dipolar order parameters and 158 N spin relaxation rates of the backbone are measured by combining the C- and H-detected multidimensional ssNMR spectra. Analysis of these experimental data by theoretic models suggests that the small-amplitude (~10°) collective motions of the transmembrane α helices on the nanosecond-to-microsecond timescales are dominant for the dynamics of AqpZ. The MD simulations demonstrate that these collective motions are critical to the water transfer efficiency of AqpZ by facilitating the opening of the channel and accelerating the water-residue hydrogen bonds renewing in the selectivity filter region.
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http://dx.doi.org/10.1126/sciadv.ade9520 | DOI Listing |
Glob Adv Integr Med Health
December 2024
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Background: Cancer among young adults (18-39 years) is relatively rare, but remains a leading cause of disability, morbidity, and mortality. Identifying strategies to support young adults' health following a diagnosis of cancer is important. Yoga may enhance health and could be delivered by videoconference.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
January 2025
Department of Physics of Complex Systems, Weizmann Institute of Science, 7610001 Rehovot, Israel.
Biological ensembles use collective intelligence to tackle challenges together, but suboptimal coordination can undermine the effectiveness of group cognition. Testing whether collective cognition exceeds that of the individual is often impractical since different organizational scales tend to face disjoint problems. One exception is the problem of navigating large loads through complex environments and toward a given target.
View Article and Find Full Text PDFJ Phys Chem B
December 2024
Department of Earth and Planetary Sciences and Origins of Life Initiative, Harvard University, 20 Oxford Street, Cambridge, Massachusetts 02138, United States.
We report the interactions and dynamics of chemically powered soft swimmers that undergo autonomous oscillatory motion. The interaction of autonomous entities is the basis for the development of collective behaviors among biological organisms. Collective behaviors enable organisms to efficiently attain food and coordinate against threats.
View Article and Find Full Text PDFCells Dev
December 2024
Department of Mechanical and Aerospace Engineering, University of Florida, Gainesville, FL 32605, United States of America; Department of Materials Science and Engineering, University of Florida, Gainesville, FL 32605, United States of America; J. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, Gainesville, FL 32605, United States of America. Electronic address:
Transitions between solid-like and fluid-like states in living tissues have been found in steps of embryonic development and in stages of disease progression. Our current understanding of these transitions has been guided by experimental and theoretical investigations focused on how motion becomes arrested with increased mechanical coupling between cells, typically as a function of packing density or cell cohesiveness. However, cells actively respond to externally applied forces by contracting after a time delay, so it is possible that at some packing densities or levels of cell cohesiveness, mechanical coupling stimulates cell motion instead of suppressing it.
View Article and Find Full Text PDFScience
December 2024
Institute of Physics, Swiss Federal Institute of Technology Lausanne (EPFL), Lausanne, Switzerland.
Collective phenomena arise from interactions within complex systems, leading to behaviors absent in individual components. Observing quantum collective phenomena with macroscopic mechanical oscillators has been impeded by the stringent requirement that oscillators be identical. We demonstrate the quantum regime for collective motion of = 6 mechanical oscillators, a hexamer, in a superconducting circuit optomechanical platform.
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