The genetic mechanisms of reproductive isolation have been widely investigated within Asian cultivated rice (); however, relevant genes between diverged species have been in sighted rather less. Herein, a gene showing selfish behavior was discovered in hybrids between the distantly related rice species and . The selfish allele in the locus impaired male fertility, discriminately eliminating pollens containing the allele from in heterozygotes (/). Genetic analysis revealed that a gene encoding a chromatin-remodeling factor (CHR) is involved in this phenomenon and a variety of owns the truncated gene , whereas its homologue has a complete structure in . CRISPR-Cas9-mediated loss of function mutants restored fertility in hybrids. African cultivated rice, which naturally lacks the homologue, is compatible with both and carriers. These results suggest that is a Killer gene, which leads to reproductive isolation.
Download full-text PDF |
Source |
---|---|
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11067373 | PMC |
http://dx.doi.org/10.1016/j.isci.2024.109761 | DOI Listing |
Sci Rep
December 2024
Institute of Botany State Key Laboratory of Systematic and Evolutionary Botany, Chinese Academy of Sciences, 100093, Beijing, China.
Phenological and morphological variation are widely viewed as a pivotal driver of ecological adaptation and speciation. Here, we investigate variation patterns of flowering phenology and morphological traits within and between O. rufipogon and O.
View Article and Find Full Text PDFAs the number and variety of assembled genomes continues to grow, the number of annotated genomes is falling behind, particularly for eukaryotes. DNA-based mapping tools help to address this challenge, but they are only able to transfer annotation between closely-related species. Here we introduce LiftOn, a homology-based software tool that integrates DNA and protein alignments to enhance the accuracy of genome-scale annotation and to allow mapping between relatively distant species.
View Article and Find Full Text PDFFront Plant Sci
December 2024
Laboratory of Plant Molecular Biology and Biotechnology, Department of Biology, The University of North Carolina at Greensboro, Greensboro, NC, United States.
Tef [ (Zucc.) Trotter] is the major staple crop for millions of people in Ethiopia and Eritrea and is believed to have been domesticated several thousand years ago. Tef has the smallest grains of all the cereals, which directly impacts its productivity and presents numerous challenges to its cultivation.
View Article and Find Full Text PDFPlant Commun
December 2024
Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China; Yazhouwan National Laboratory, Sanya, 572024, China; Academician workstation, National Nanfan Research Institute (Sanya), Chinese Academy of Agricultural Sciences, Sanya, 572024, China. Electronic address:
By integrating genomes of different accessions, the pangenome can offer more comprehensive and reference-bias-free population genetic information in a species than a single reference genome. With the rapid accumulation of genomic sequencing data and the expanding scope of plant research, the focus of plant pangenomics research has gradually evolved from a single species to multiple species in recent years, giving rise to the concept of super pangenome that cover all genomic sequences of a genus-level taxonomic groups. By integrating more cultivated and wild species, the super pangenome has made significant contributions to the resolution of multiple research areas such as plant genetic diversity, evolution, domestication, and molecular breeding.
View Article and Find Full Text PDFPlant Physiol Biochem
December 2024
Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, 350002, Fuzhou, China; Key Laboratory of Biological Breeding for Fujian and Taiwan Crops, Ministry of Agriculture and Rural Affairs, Key Laboratory of Crop Biotechnology of Fujian Higher Education Institutes, Fujian Agriculture and Forestry University, Fuzhou, China. Electronic address:
Recent studies have demonstrated that the primary transcript of miRNAs (pri-miRNAs) are able to encode small peptides influencing plant growth and development, as well as responses to various environmental cues. However, their role in plant responses to salt stress is not fully comprehended. Here, we characterized a short peptide encoded by miR172b (miPEP172b) in rice (Oryza sativa L.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!