AI Article Synopsis

  • The study investigates CRNDE(P), a long non-coding RNA considered an oncogene, and confirms its role as a micropeptide-coding gene called CRNDEP, which contributes to ovarian cancer (OvCa) metabolism and drug resistance.
  • Using mass spectrometry, the researchers validated the CRNDEP sequence and found its strong presence in mitotic cell structures, linking it to key processes like DNA transcription and cell cycle progression.
  • The findings suggest that high CRNDE(P) expression enhances OvCa cells' resistance to chemotherapy, affects microtubule activity, and hints at the micropeptide's potential RNA-binding abilities, offering insights for improved OvCa diagnosis and treatment.

Article Abstract

is considered an oncogene expressed as long non-coding RNA. Our previous paper is the only one reporting as a micropeptide-coding gene. The amino acid sequence of this micropeptide (CRNDEP) has recently been confirmed by other researchers. This study aimed at providing a mass spectrometry (MS)-based validation of the CRNDEP sequence and an investigation of how the differential expression of CRNDE(P) influences the metabolism and chemoresistance of ovarian cancer (OvCa) cells. We also assessed cellular localization changes of CRNDEP, looked for its protein partners, and bioinformatically evaluated its RNA-binding capacities. Herein, we detected most of the CRNDEP sequence by MS. Moreover, our results corroborated the oncogenic role of , portraying it as the gene impacting carcinogenesis at the stages of DNA transcription and replication, affecting the RNA metabolism, and stimulating the cell cycle progression and proliferation, with CRNDEP being detected in the centrosomes of dividing cells. We also showed that CRNDEP is located in nucleoli and revealed interactions of this micropeptide with p54, an RNA helicase. Additionally, we proved that high CRNDE(P) expression increases the resistance of OvCa cells to treatment with microtubule-targeted cytostatics. Furthermore, altered CRNDE(P) expression affected the activity of the microtubular cytoskeleton and the formation of focal adhesion plaques. Finally, according to our in silico analyses, CRNDEP is likely capable of RNA binding. All these results contribute to a better understanding of the CRNDE(P) role in OvCa biology, which may potentially improve the screening, diagnosis, and treatment of this disease.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11050281PMC
http://dx.doi.org/10.3390/ijms25084381DOI Listing

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