Semi-supervised model based on implicit neural representation and mutual learning (SIMN) for multi-center nasopharyngeal carcinoma segmentation on MRI.

Comput Biol Med

School of Biomedical Engineering, Southern Medical University, 1023 Shatai Road, Guangzhou, 510515, China; School of Biomedical Engineering and Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University, 1023 Shatai Road, Guangzhou, 510515, China; Guangdong Province Engineering Laboratory for Medical Imaging and Diagnostic Technology, Southern Medical University, 1023 Shatai Road, Guangzhou, 510515, China; Pazhou Lab, Guangzhou, 510515, China. Electronic address:

Published: June 2024

AI Article Synopsis

  • The study addresses the challenge of accurately segmenting gross tumor volume (GTV) and metastatic lymph nodes (MLN) in nasopharyngeal carcinoma (NPC) using deep learning on diverse MRI images with few labeled samples.
  • Researchers developed a semi-supervised framework called SIMN, which combines CNN and Transformer models with uncertainty-based techniques to improve boundary delineation across various medical centers.
  • Results show that SIMN achieved high overlap ratios with the ground truth for GTV and MLN segmentation, demonstrating its effectiveness and potential for wider clinical application without the need for extensive fine-tuning.

Article Abstract

Background: The issue of using deep learning to obtain accurate gross tumor volume (GTV) and metastatic lymph nodes (MLN) segmentation for nasopharyngeal carcinoma (NPC) on heterogeneous magnetic resonance imaging (MRI) images with limited labeling remains unsolved.

Method: We collected 918 patients with MRI images from three hospitals to develop and validate models and proposed a semi-supervised framework for the fine delineation of multi-center NPC boundaries by integrating uncertainty-based implicit neural representations named SIMN. The framework utilizes the deep mutual learning approach with CNN and Transformer, incorporating dynamic thresholds. Additionally, domain adaptive algorithms are employed to enhance the performance.

Results: SIMN predictions have a high overlap ratio with the ground truth. Under the 20 % labeled cases, for the internal test cohorts, the average DSC in GTV and MLN are 0.7981 and 0.7804, respectively; for external test cohort Wu Zhou Red Cross Hospital, the average DSC in GTV and MLN are 0.7217 and 0.7581, respectively; for external test cohorts First People Hospital of Foshan, the average DSC in GTV and MLN are 0.7004 and 0.7692, respectively. No significant differences are found in DSC, HD95, ASD, and Recall for patients with different clinical categories. Moreover, SIMN outperformed existing classical semi-supervised methods.

Conclusions: SIMN showed a highly accurate GTV and MLN segmentation for NPC on multi-center MRI images under Semi-Supervised Learning (SSL), which can easily transfer to other centers without fine-tuning. It suggests that it has the potential to act as a generalized delineation solution for heterogeneous MRI images with limited labels in clinical deployment.

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Source
http://dx.doi.org/10.1016/j.compbiomed.2024.108368DOI Listing

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