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Recent Advances of Oxalate Decarboxylase: Biochemical Characteristics, Catalysis Mechanisms, and Gene Expression and Regulation. | LitMetric

AI Article Synopsis

  • * The enzyme has potential applications in treating hyperoxaluria, processing low-oxalate foods, and as a diagnostic tool, yet there are unresolved questions about its interactions with substrates and how it acquires manganese ions.
  • * The review discusses OXDC's biochemical characteristics, gene regulation, and catalytic mechanisms, while also analyzing data from the National Center for Biotechnology Information to discover new variants with different biochemical traits.

Article Abstract

Oxalate decarboxylase (OXDC) is a typical Mn/Mn dependent metal enzyme and splits oxalate to formate and CO without any organic cofactors. Fungi and bacteria are the main organisms expressing the gene, but with a significantly different mechanism of gene expression and regulation. Many articles reported its potential applications in the clinical treatment of hyperoxaluria, low-oxalate food processing, degradation of oxalate salt deposits, oxalate acid diagnostics, biocontrol, biodemulsifier, and electrochemical oxidation. However, some questions still remain to be clarified about the role of substrate binding and/or protein environment in modulating the redox properties of enzyme-bound Mn(II)/Mn(III), the nature of dioxygen involved in the catalytic mechanism, and how OXDC acquires Mn(II) /Mn(III). This review mainly summarizes its biochemical and structure characteristics, gene expression and regulation, and catalysis mechanism. We also deep-mined oxalate decarboxylase gene data from National Center for Biotechnology Information to give some insights to explore new OXDC with diverse biochemical properties.

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Source
http://dx.doi.org/10.1021/acs.jafc.4c00172DOI Listing

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