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Evaluation of reference genes for quantitative expression analysis in (Coleoptera, Meloidae). | LitMetric

Evaluation of reference genes for quantitative expression analysis in (Coleoptera, Meloidae).

Front Physiol

Key Laboratory of Agricultural Genetically Modified Organisms Traceability, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Science/Supervision and Test Center (Wuhan) for Plant Ecological Environment Safety, Ministry of Agriculture and Rural Affairs, Wuhan, China.

Published: April 2024

is a hypermetamorphic insect whose adults feed on oilseed rape. However, due to a shortage of effective and appropriate endogenous references, studies on molecular functional genes in , have been tremendously limited. In this study, ten internal reference genes (, , , , , , , , and ) were tested and assessed under four selected treatments including adult ages, adult tissues, temperatures, and sex by RT-qPCR based on five methods (Ct value, geNorm, NormFinder, BestKeeper and RefFinder). Our findings showed that and were the most optimal internal reference gene combination for gene expression during various adult ages and under diverse temperatures; The combination of and was recommended to test gene transcription levels under different adult tissues. and were the best reference genes in male and female adults. and were the most appropriate reference gene pair to estimate gene expression levels under four different tested backgrounds. The relative transcript levels of a uridine diphosphate (UDP)-N-acetylglucosamine-pyrophosphorylase (), varied greatly according to normalization with the two most- and least-suited reference genes. This study will lay the basis for further molecular physiology and biochemistry studies in , such as development, reproduction, sex differentiation, cold and heat resistance.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11033477PMC
http://dx.doi.org/10.3389/fphys.2024.1345836DOI Listing

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