Biomolecular condensates, such as the nucleoli or P-bodies, are non-membrane-bound assemblies of proteins and nucleic acids that facilitate specific cellular processes. Like eukaryotic P-bodies, the recently discovered bacterial ribonucleoprotein bodies (BR-bodies) organize the mRNA decay machinery, yet the similarities in molecular and cellular functions across species have been poorly explored. Here, we examine the functions of BR-bodies in the nitrogen-fixing endosymbiont , which colonizes the roots of compatible legume plants. Assembly of BR-bodies into visible foci in cells requires the C-terminal intrinsically disordered region (IDR) of RNase E, and foci fusion is readily observed , suggesting they are liquid-like condensates that form via mRNA sequestration. Using Rif-seq to measure mRNA lifetimes, we found a global slowdown in mRNA decay in a mutant deficient in BR-bodies, indicating that compartmentalization of the degradation machinery promotes efficient mRNA turnover. While BR-bodies are constitutively present during exponential growth, the abundance of BR-bodies increases upon cell stress, whereby they promote stress resistance. Finally, using as host, we show that BR-bodies enhance competitiveness during colonization and appear to be required for effective symbiosis, as mutants without BR-bodies failed to stimulate plant growth. These results suggest that BR-bodies provide a fitness advantage for bacteria during infection, perhaps by enabling better resistance against the host immune response.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11014517PMC
http://dx.doi.org/10.1101/2024.04.05.588320DOI Listing

Publication Analysis

Top Keywords

br-bodies
10
mrna decay
8
mrna
5
br-bodies promote
4
promote fitness
4
fitness host
4
host colonization
4
colonization biomolecular
4
biomolecular condensates
4
condensates nucleoli
4

Similar Publications

Bacterial ribonucleoprotein bodies (BR-bodies) are dynamic biomolecular condensates that play a pivotal role in RNA metabolism. We investigated how BR-bodies significantly influence mRNA fate by transitioning between liquid- and solid-like states in response to stress. With a combination of single-molecule and bulk fluorescence microscopy, biochemical assays, and quantitative analyses, we determine that BR-bodies promote efficient mRNA decay in a liquid-like condensate during exponential growth.

View Article and Find Full Text PDF

RNase E is the most common RNA decay nuclease in bacteria, setting the global mRNA decay rate and scaffolding formation of the RNA degradosome complex and BR-bodies. To properly set the global mRNA decay rate, RNase E from and neighboring γ-proteobacteria were found to autoregulate RNase E levels via the decay of its mRNA's 5' untranslated region (UTR). While the 5' UTR is absent from other groups of bacteria in the Rfam database, we identified that the α-proteobacterium RNase E contains a similar 5' UTR structure that promotes RNase E autoregulation.

View Article and Find Full Text PDF

Biomolecular condensates, such as the nucleoli or P-bodies, are non-membrane-bound assemblies of proteins and nucleic acids that facilitate specific cellular processes. Like eukaryotic P-bodies, the recently discovered bacterial ribonucleoprotein bodies (BR-bodies) organize the mRNA decay machinery, yet the similarities in molecular and cellular functions across species have been poorly explored. Here, we examine the functions of BR-bodies in the nitrogen-fixing endosymbiont , which colonizes the roots of compatible legume plants.

View Article and Find Full Text PDF
Article Synopsis
  • Bacterial cells organize their cytoplasm using biomolecular condensates (BMCs), which are nonmembrane-bound organelles formed through phase separation.
  • Bacterial ribonucleoprotein bodies (BR-bodies) are a key example of BMCs that house RNA decay machinery, showing functional similarities to eukaryotic structures like P-bodies and stress granules.
  • Despite differences in mRNA decay processes, recent studies indicate evolutionary convergence in the types of enzymes found in these condensates across bacteria and eukaryotes.
View Article and Find Full Text PDF

RNase E is the most common RNA decay nuclease in bacteria, setting the global mRNA decay rate and scaffolding formation of the RNA degradosome complex and BR-bodies. To properly set the global mRNA decay rate, RNase E from and neighboring γ-proteobacteria were found to autoregulate RNase E levels via the decay of its mRNA's 5' UTR. While the 5' UTR is absent from other groups of bacteria in the Rfam database, we identified that the α-proteobacterium RNase E contains a similar 5' UTR structure that promotes RNase E autoregulation.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!