No Headache for PIPs: A PIP Potential for Aspirin Runs Much Faster and with Similar Precision Than Other Machine-Learned Potentials.

J Chem Theory Comput

Department of Chemistry, Cherry L. Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, United States.

Published: April 2024

AI Article Synopsis

  • Recent assessments highlight the efficiency of the linear-regression permutationally invariant polynomial (PIP) method in machine-learning potentials, particularly for ethanol, showing it outperforms methods like ANI and PhysNet in both precision and speed.
  • The current study extends this evaluation to the 21-atom aspirin molecule, utilizing the rMD17 data set, and focuses on the PIP method's speed and precision in training on energies and forces.
  • Results indicate that the PIP method matches the precision of other machine-learning techniques while significantly exceeding them in evaluation speed, demonstrating its ability to effectively represent various internal motions of aspirin, including the OH stretch.

Article Abstract

Assessments of machine-learning (ML) potentials are an important aspect of the rapid development of this field. We recently reported an assessment of the linear-regression permutationally invariant polynomial (PIP) method for ethanol, using the widely used (revised) rMD17 data set. We demonstrated that the PIP approach outperformed numerous other methods, e.g., ANI, PhysNet, sGDML, and p-KRR, with respect to precision and notably with respect to speed [Houston et al., , 156, 044120]. Here, we extend this assessment to the 21-atom aspirin molecule, using the rMD17 data set, with a focus on the speed of evaluation. Both energies and forces are used for training, and the precision of several PIPs is examined for both. Normal mode frequencies, the methyl torsional potential, and 1d vibrational energies for an OH stretch are presented. We show that the PIP approach achieves the level of precision obtained from other ML methods, e.g., atom-centered neural network methods, linear regression ACE, and kernel methods, as reported by Kovács et al. in , 17, 7696-7711. More significantly, we show that the PIP PESs run much faster than all other ML methods, whose timings were evaluated in that paper. We also show that the PIP PES extrapolates well enough to describe several internal motions of aspirin, including an OH stretch.

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Source
http://dx.doi.org/10.1021/acs.jctc.4c00054DOI Listing

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