Localization data of the T-DNA insertion site in Arabidopsis line SALK_146824C.

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Institute of Biology, Komi Scientific Center, Ural Division RAS, Kommunisticheskaya 28, 167982 Syktyvkar, Russia.

Published: June 2024

The present work reports on the determination of localization of T-DNA insertion in SALK_146824C line. The line is characterized as deficient in GDP-l-galactose phosphorylase 1 () gene encodes a protein involved in ascorbate biosynthesis. Primer pairs allow to distinguishing SALK_146824C from wild type plants and to the exact localization of the insertion were designed used. Sanger sequencing confirmed the location of the T-DNA insertion in the sixth exon of the gene. RT-PCR data shows nearly undetectable levels of mRNA expression level in SALK_146824C line as compared with wild type plants of Columbia-0 line. Localization of the primer pair upstream and downstream the T-DNA insertion did not affect the expression values.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10981032PMC
http://dx.doi.org/10.1016/j.dib.2024.110309DOI Listing

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