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is an important Gram-negative industrial microorganism that produces vitamin C and other products due to its efficient membrane-bound dehydrogenase system. Its incomplete oxidation system has many crucial industrial applications. However, it also leads to slow growth and low biomass, requiring further metabolic modification for balancing the cell growth and incomplete oxidation process. As a non-model strain, lacks efficient genome editing tools and cannot perform rapid multi-gene editing and complex metabolic network regulation. In the last 15 years, our laboratory attempted to deploy multiple CRISPR/Cas systems in different strains and found none of them as functional. In this study, Cpf1-based or dCpf1-based CRISPRi was constructed to explore the targeted binding ability of Cpf1, while Cpf1-FokI was deployed to study its nuclease activity. A study on Cpf1 found that the CRISPR/Cpf1 system could locate the target genes in but lacked the nuclease cleavage activity. Therefore, the CRISPR/Cpf1-FokI system based on FokI nuclease was constructed. Single-gene knockout with efficiency up to 100% and double-gene iterative editing were achieved in . Using this system, AcrVA6, the anti-CRISPR protein of was discovered for the first time, and efficient genome editing was realized.
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http://dx.doi.org/10.1016/j.synbio.2024.02.009 | DOI Listing |
Sci Total Environ
March 2025
Lappeenranta-Lahti University of Technology LUT, Department of Separation Science, Yliopistonkatu 34, 53850 Lappeenranta, Finland.
Vivianite presents a significant phosphorus pool in iron-rich, reducing environments, necessitating the development of an affordable and routine quantification method. A novel extraction protocol using 2,2'-bipyridine (Bipy) was proposed as a promising approach. However, the efficacy of this protocol in achieving complete vivianite extraction remains uncertain and lacks robust analytical validation.
View Article and Find Full Text PDFMethods Mol Biol
March 2025
Department of Biotechnology, Biomedical Research Foundation of the Academy of Athens, Athens, Greece.
Lipofuscin, a yellow-brown complex mainly found in cellular waste, accumulates in cells as a byproduct of cellular degradation processes and is commonly associated with aging and oxidative stress. Lipofuscin's molecular "signature" comprises a diverse repertoire of oxidized proteins, lipids, and metals, yet the detailed protein composition of this unique complex remains undetermined. Toward this end, high-throughput proteomic analyses of lipofuscin are pivotal for elucidating its global protein content, the protein interactome, as well as biological mechanisms related to senescence-associated lipofuscin accumulation.
View Article and Find Full Text PDFMol Med
March 2025
Reproductive Center, The First Affiliated Hospital of Shantou University Medical College, Shantou University, Shantou, 515041, China.
Transposable elements (TEs) comprise approximately half of eukaryotic genomes and significantly contribute to genome plasticity. In this study, we focused on a specific TE, MERVL, which exhibits particular expression during the 2-cell stage and commonly serves as an indicator of embryonic totipotency. However, its precise role in embryo development remains mysterious.
View Article and Find Full Text PDFEur J Dent
March 2025
Department of Operative Dentistry, Faculty of Dentistry, Chulalongkorn University, Bangkok, Thailand.
Objective: The aim of this study was to compare the effectiveness of various cleaning protocols on the bond strength of dual-cure resin cement following temporary cementation.
Materials And Methods: Fifty-two human third molars were sectioned to expose superficial dentin and divided into four groups: (1) fresh, noncontaminated dentin (control); (2) pumice cleaning; (3) pumice + sodium bicarbonate air polishing; and (4) pumice + 10-methacryloyloxydecyl dihydrogen phosphate (MDP) based cleaner. Groups 2, 3, and 4 were treated with noneugenol zinc oxide temporary cement, followed by their respective cleaning protocols.
Sci Total Environ
March 2025
Department of Environmental Studies, University of Delhi, New Delhi, India. Electronic address:
Climate change is increasingly driving extreme weather events, leading to drastic temperature fluctuations worldwide. While overall temperatures rise, many regions are simultaneously experiencing severe cold spells that threaten the health of human populations, especially to vulnerable populations including the elderly and those with pre-existing conditions. Exposure to cold stress triggers significant physiological and biochemical disruptions.
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