In this study, we employed a polyphasic approach to determine the taxonomic position of a newly isolated actinomycete, designated SE31, obtained from a sediment sample collected at Cape Rochado, Malaysia. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain SE31 belonged to the family Pseudonocardiaceae and exhibited the highest sequence similarity (98.9%) to Sciscionella marina. Further genomic analysis demonstrated a 93.4% average nucleotide identity and 54.4% digital DNA-DNA hybridization relatedness between strain SE31 and S. marina. The chemotaxonomic characteristics of strain SE31 were typical of the genus Sciscionella, including cell-wall chemotype IV (with meso-diaminopimelic acid as the diagnostic diamino acid, and arabinose and galactose as whole-cell sugars). The identified polar lipids of strain SE31 were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylmethylethanolamine, and hydroxyphosphatidymethylethanolamine. The primary menaquinone observed was MK-9(H), and the major cellular fatty acid was iso-C. The genomic DNA size of strain SE31 was determined to be 7.4 Mbp with a G+C content of 68.7%. Based on these comprehensive findings, strain SE31 represents a novel species within the genus Sciscionella, in which the name Sciscionella sediminilitoris sp. nov. is proposed. The type strain of Sciscionella sediminilitoris is SE31 (= DSM 46824 = TBRC 5134).
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http://dx.doi.org/10.1007/s00284-024-03634-8 | DOI Listing |
Curr Microbiol
March 2024
Institute of Biological Sciences, Faculty of Science, Universiti Malaya, 50603, Kuala Lumpur, Malaysia.
In this study, we employed a polyphasic approach to determine the taxonomic position of a newly isolated actinomycete, designated SE31, obtained from a sediment sample collected at Cape Rochado, Malaysia. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain SE31 belonged to the family Pseudonocardiaceae and exhibited the highest sequence similarity (98.9%) to Sciscionella marina.
View Article and Find Full Text PDFMar Genomics
April 2015
Microbial Resources Laboratory, Institute of Biological Sciences, University of Malaya, 50603 Kuala Lumpur, Malaysia; Institute of Ocean and Earth Sciences, Institute of Postgraduate Studies Building, University of Malaya, 50603 Kuala Lumpur, Malaysia. Electronic address:
The bacterium strain SE31, a member of the genus Sciscionella, was isolated from intertidal sediments collected from Cape Rachado, Malaysia. The high quality draft genome sequence of Sciscionella strain SE31 with a genome size of approximately 7.4 Mbp is reported.
View Article and Find Full Text PDFJ Gen Microbiol
December 1987
Department of Biochemistry and Molecular Biophysics, College of Physicians and Surgeons, Columbia University, New York, New York 10032.
A mutant strain of Escherichia coli, strain AK23, is devoid of hydrogenase activity when grown anaerobically on glucose and cannot grow on H2 plus fumarate. From E. coli chromosomal DNA library, a plasmid, pAK23, was isolated which restored hydrogenase activity in this strain.
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