Towards interpretable machine learning for observational quantification of soil heavy metal concentrations under environmental constraints.

Sci Total Environ

Guangdong Provincial Key Laboratory of Remote Sensing and Geographical Information System, Guangdong Open Laboratory of Geospatial Information Technology and Application, Guangdong Engineering Technology Research Center of Remote Sensing Big Data Application, Guangzhou Institute of Geography, Guangdong Academy of Science, Guangzhou 510070, China.

Published: May 2024

AI Article Synopsis

  • Monitoring heavy metal concentrations in soils is crucial for agricultural safety, and satellite observations can help estimate these concentrations despite challenges with weak spectral responses.
  • Interpretable machine learning (ML) models were developed to quantify metal concentrations like chromium (Cr) and cadmium (Cd), using factors such as pH and organic carbon along with spectral data.
  • Results showed that certain model combinations greatly improved prediction accuracy, highlighting the importance of selecting soil samples with high organic carbon and low pH for better estimates and proactive contamination management.

Article Abstract

Monitoring heavy metal concentrations in soils is central to assessing agricultural production safety. Satellite observations permit inferring concentrations from spectrum, thereby contributing to the prevention and control of soil heavy metal pollution. However, heavy metals exhibit weak spectral responses, particularly at low and medium concentrations, and are predominantly influenced by other soil components. Machine learning (ML)-driven modelling can produce predictions but lacks interpretability. Here, we present an interpretable ML framework for concentration quantification modelling and investigated the contributions of spectral and environmental factors-pH and organic carbon-to the estimation of metals with multiple concentration gradients, as analysed through SHAP (SHapley Additive exPlanations) data derived from four learning-based scenarios. The results indicated that scenarios SHC (spectral, pH, and organic carbon) and SH (spectral and pH) were the most optimal for chromium (Cr) [RPD = 1.42, Adj R = 0.62], and cadmium (Cd) [RPD = 1.80, Adj R = 0.80]. Under environmental constraints, the spectral predictability for Cr and Cd was improved by 67 % and 87 %, respectively. We concluded that interpretable modelling, utilising both spectral and soil environmental factors, holds significant potential for estimating heavy metals across concentration gradients. It is recommended that samples with higher organic carbon content and lower pH be selected to enhance Cr and Cd predictions. An advanced grasp of interpretable predictions facilitates earlier warning of heavy metal contamination and guides the formulation of robust sampling strategies.

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http://dx.doi.org/10.1016/j.scitotenv.2024.171931DOI Listing

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