Complete genome sequence of the novel Antarctic Oceanisphaera sp. IT1-181 that carried five plasmids.

Mar Genomics

Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai 200136, China; School of Oceanography, Shanghai Jiao Tong University, Shanghai 200030, China. Electronic address:

Published: April 2024

AI Article Synopsis

  • Oceanisphaera sp. IT1-181 is a newly identified bacterium isolated from intertidal sediment near the Chinese Great Wall Station in Antarctica, showcasing its broad distribution in marine environments.
  • The complete genome of strain IT1-181 consists of a single chromosome and five plasmids, containing a total of 3,229 protein-coding genes, along with 88 tRNA and 25 rRNA genes.
  • Analysis of its genome indicates it may be a unique species capable of producing ectoine and poly-β-hydroxybutyric acid, as well as exhibiting a complete CRISPR-Cas system, highlighting its potential applications in biotechnology and its ecological importance in the Antarctic.

Article Abstract

Bacteria of the genus Oceanisphaera in the class Gammaproteobacteria are widely distributed in marine environments. Oceanisphaera sp. IT1-181 was isolated from intertidal sediment in the coastal region of the Chinese Great Wall Station on the Fildes Peninsula, King George Island, Antarctica. Here, we sequenced the complete genome of strain IT1-181, which contained a single chromosome of 3,572,184 bp (G + C content of 49.89 mol%) with five plasmids. A total of 3229 protein-coding genes, 88 tRNA genes, and 25 rRNA genes were obtained. Genome sequence analysis revealed that strain IT1-181 was not only a potentially novel species of the genus Oceanisphaera, but also harbored genes involved in biosynthesizing ectoine as well as poly-β-hydroxybutyric acid (PHB). In addition, genes of a complete type I-E CRISPR-Cas system were found in the bacterium. The results indicate the potential of strain Oceanisphaera sp. IT1-181 in biotechnology and are helpful for us understanding its ecological roles in the changing Antarctic intertidal zone environment.

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Source
http://dx.doi.org/10.1016/j.margen.2024.101083DOI Listing

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