Background And Purpose: The ability to determine the risk and predictors of lymphedema is vital in improving the quality of life for head and neck (HN) cancer patients. However, selecting robust features is challenging due to the multicollinearity and high dimensionality of radiotherapy (RT) data. This study aims to overcome these challenges using an ensemble feature selection technique with machine learning (ML).
Materials And Methods: Thirty organs-at-risk, including bilateral cervical lymph node levels, were contoured, and dose-volume data were extracted from 76 HN treatment plans. Clinicopathologic data was collected. Ensemble feature selection was used to reduce the number of features. Using the reduced features as input to ML and competing risk models, internal and external lymphedema prediction capability was evaluated with the ML models, and time to lymphedema event and risk stratification were estimated using the risk models.
Results: Two ML models, XGBoost and random forest, exhibited robust prediction performance. They achieved average F1-scores and AUCs of 84 ± 3.3 % and 79 ± 11.9 % (external lymphedema), and 64 ± 12 % and 78 ± 7.9 % (internal lymphedema). Predictive ML and risk models identified common predictors, including bulky node involvement, high dose to various lymph node levels, and lymph nodes removed during surgery. At 180 days, removing 0-25, 26-50, and > 50 lymph nodes increased external lymphedema risk to 72.1 %, 95.6 %, and 57.7 % respectively (p = 0.01).
Conclusion: Our approach, involving the reduction of HN RT data dimensionality, resulted in effective ML models for HN lymphedema prediction. Predictive dosimetric features emerged from both predictive and competing risk models. Consistency with clinicopathologic features from other studies supports our methodology.
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http://dx.doi.org/10.1016/j.ctro.2024.100747 | DOI Listing |
JACS Au
December 2024
Department of Biochemistry, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.
It has become increasingly evident that the conformational distributions of intrinsically disordered proteins or regions are strongly dependent on their amino acid compositions and sequence. To facilitate a systematic investigation of these sequence-ensemble relationships, we selected a set of 16 naturally occurring intrinsically disordered regions of identical length but with large differences in amino acid composition, hydrophobicity, and charge patterning. We probed their conformational ensembles with single-molecule Förster resonance energy transfer (FRET), complemented by circular dichroism (CD) and nuclear magnetic resonance (NMR) spectroscopy as well as small-angle X-ray scattering (SAXS).
View Article and Find Full Text PDFFront Neural Circuits
December 2024
Cognitive Neurophysiology, Brain Research Institute, University of Bremen, Bremen, Germany.
Introduction: A fundamental property of the neocortex is its columnar organization in many species. Generally, neurons of the same column share stimulus preferences and have strong anatomical connections across layers. These features suggest that neurons within a column operate as one unified network.
View Article and Find Full Text PDFEnviron Res
December 2024
Lise Meitner Group for Environmental Neuroscience, Max Planck Institute for Human Development, Berlin, Germany; University Medical Center Hamburg-Eppendorf, Clinic and Policlinic for Psychiatry and Psychotherapy, Hamburg, Germany; Max Planck-UCL Center for Computational Psychiatry and Ageing Research. Electronic address:
It is by now well known that the environment has a major impact on people's life, but the neural structures involved in this relationship remain to be explored. Most studies investigating this relationship only focus on single environmental predictors. In order to understand how the multitude of factors constituting the living environment relate to brain structure we used data from the UK Biobank (n= 21,094; age Mean=63.
View Article and Find Full Text PDFEur J Radiol
December 2024
Department of Diagnostic Radiology, City of Hope National Medical Center, Duarte, CA, USA.
Objective: Differentiating between brain metastasis (BM) and glioblastoma (GBM) preoperatively is challenging due to their similar imaging features on conventional brain MRI. This study aimed to enhance diagnostic accuracy through a machine learning model based on MRI radiomics data.
Methods: This retrospective study included 235 patients with confirmed solitary BM and 273 patients with GBM.
Sci Rep
December 2024
Advanced Research Institute for Digital-Twin Water Conservancy, North China University of Water Resources and Electric Power, Zhengzhou, 450046, China.
Traditional hydraulic structures rely on manual visual inspection for apparent integrity, which is not only time-consuming and labour-intensive but also inefficient. The efficacy of deep learning models is frequently constrained by the size of available data, resulting in limited scalability and flexibility. Furthermore, the paucity of data diversity leads to a singular function of the model that cannot provide comprehensive decision support for improving maintenance measures.
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