sp. nov., a facultatively anaerobic bacterium isolated from pig faeces.

Int J Syst Evol Microbiol

ABS Research Support Center, KRIBB, 125 Gwahak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.

Published: February 2024

AI Article Synopsis

  • - Two new strains of bacteria, YH-aer221 and YH-aer222, were discovered in pig feces and are similar to the known strain JCM 18035 with over 96% genetic similarity.
  • - Various genetic analyses, including average nucleotide identity and digital DNA-DNA hybridization, confirmed their distinct status with low similarity to other bacteria, indicating they belong to a new category.
  • - The bacteria possess unique features like a specific fatty acid profile and shared metabolic pathways, and both isolates have the same CRISPR array, leading to the proposal of a new species name.

Article Abstract

Two cocci-shaped, facultatively anaerobic, Gram-positive bacteria isolated from the faeces of a pig were designated as strains YH-aer221 and YH-aer222. Analysis of the 16S rRNA gene sequences revealed that the isolates were most closely related to JCM 18035 with 96.6 % similarity. The multi-locus sequence tree revealed that the isolates formed a sub-cluster adjacent to JCM 18035. The average nucleotide identity values for the isolates and their most closely related strains were 71.8 and 71.7 %, respectively; and the digital DNA-DNA hybridization values for the isolates and their most closely related strains were 25.6 and 25.5 %, respectively. The main fatty acids were Cω9, C and C. The cell wall contained the -diaminopimelic acid-based peptidoglycan. The two isolates shared the same metabolic pathways. Isolates YH-aer221 and YH-aer222 harboured the same CRISPR array with 33 and 46 spacers, respectively. Single-genome vs. metagenome analysis showed that the genomes of the isolates were not found in the available metagenome database. Given their chemotaxonomic, phenotypic and phylogenetic properties, YH-aer221 (= KCTC 25571=JCM 35699) and YH-aer222 (=KCTC 25573=JCM 35700) represent a novel taxon. The name sp. nov. is proposed.

Download full-text PDF

Source
http://dx.doi.org/10.1099/ijsem.0.006284DOI Listing

Publication Analysis

Top Keywords

isolates closely
12
facultatively anaerobic
8
yh-aer221 yh-aer222
8
revealed isolates
8
jcm 18035
8
values isolates
8
closely strains
8
isolates
7
nov facultatively
4
anaerobic bacterium
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!