Characterization of the complete chloroplast genome of 'Quanhong poplar' ( W. Bartram ex Humphry Marshall, 2011).

Mitochondrial DNA B Resour

Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing, China.

Published: February 2024

The color of the leaves is one of the most important factors for horticultural crops that are considered by breeders, and is also attracting more and more attention from economists and academics. 'Quanhong poplar' (QHP), a rare, bright reddish-purple color-leaf cultivar that has been widely cultivated in China as a landscape tree, is a very precious color-leaf cultivar. In the present study, a reference-based assembly was performed using whole-genome sequencing data to characterize the chloroplast genome of 'QHP'. The total chloroplast genome size of 'QHP' is 156,950 bp, which is divided into two inverted repeat structures of 27,649 bp each, a small single-copy region of 16,563 bp, and a large single-copy region (LSC) of 85,089 bp. From the chloroplast genome, 130 genes have been predicted, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. A chloroplast genome containing 36.68% GC content was detected in 'QHP'. Three SNP sites have been developed between 'QHP' and Zhonglin 2025. Based on the phylogenetic analysis of chloroplast genomes reported for , the chloroplast of 'QHP' is closest to several strains of .

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10896124PMC
http://dx.doi.org/10.1080/23802359.2024.2318391DOI Listing

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