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Directed Evolution of Near-Infrared Serotonin Nanosensors with Machine Learning-Based Screening. | LitMetric

Directed Evolution of Near-Infrared Serotonin Nanosensors with Machine Learning-Based Screening.

Nanomaterials (Basel)

Department of Biomedical Convergence Engineering, Pusan National University, Yangsan 50612, Republic of Korea.

Published: January 2024

AI Article Synopsis

  • The study utilized a new method combining directed evolution and machine learning to enhance the performance of serotonin-responsive ssDNA-wrapped single-walled carbon nanotube nanosensors.
  • Through three optimization rounds, the researchers improved the sensitivity of the nanosensors by 2.5 times the original fluorescence response to serotonin.
  • After focusing on selectivity, they achieved a 1.6-fold increase in distinguishing serotonin from dopamine, establishing strong reference sequences for future serotonin biosensor research.

Article Abstract

In this study, we employed a novel approach to improve the serotonin-responsive ssDNA-wrapped single-walled carbon nanotube (ssDNA-SWCNT) nanosensors, combining directed evolution and machine learning-based prediction. Our iterative optimization process is aimed at the sensitivity and selectivity of ssDNA-SWCNT nanosensors. In the three rounds for higher serotonin sensitivity, we substantially improved sensitivity, achieving a remarkable 2.5-fold enhancement in fluorescence response compared to the original sequence. Following this, we directed our efforts towards selectivity for serotonin over dopamine in the two rounds. Despite the structural similarity between these neurotransmitters, we achieved a 1.6-fold increase in selectivity. This innovative methodology, offering high-throughput screening of mutated sequences, marks a significant advancement in biosensor development. The top-performing nanosensors, N2-1 (sensitivity) and L1-14 (selectivity) present promising reference sequences for future studies involving serotonin detection.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10856788PMC
http://dx.doi.org/10.3390/nano14030247DOI Listing

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