Genomic insight into -demethylation of 4-methoxybenzoate by a two-component system from KCCM40447.

Heliyon

Department of Life Science and Biochemical Engineering, Sun Moon University, Asan, Republic of Korea.

Published: February 2024

AI Article Synopsis

  • Cytochrome P450 monooxygenases, like CYP199A35 found in KCCM40447, are essential for producing hydroxylated compounds that aid microorganisms in survival.
  • The genome analysis of KCCM40447 unveiled a circular genome of about 9.1 million base pairs and identified 8601 protein-encoding genes, including CYP199A35, which is linked to a specific transporter gene (PcaK).
  • Experimental validation and bioinformatics showed that KCCM40447 has a complete pathway to metabolize 4-methoxybenzoate, demonstrating the effectiveness of its enzymatic processes.

Article Abstract

Cytochrome P450 monooxygenases perform a multitude of roles, including the generation of hydroxylated aromatic compounds that might be utilized by microorganisms for their survival. WGS data of KCCM40447 revealed a complete circular genome of 9,099,986 base pairs and functionally assigned 8601 protein-encoding genes. Genomic analysis confirmed that the gene for 4-methoxybenzoate monoxygenase (CYP199A35) was conserved in close proximity to the gene for 4-hydroxybenzoate transporter (PcaK). The co-localized genes encoding CYP199A35, and ferredoxin-NAD(P) reductase (Mbr) represent a two-component system for electron transfer. CYP199A35 was specific for -demethylation of -methyl substituted benzoic acid derivatives, 4-methoxybenzoate (4 MB), and 4-methoxycinnamic acid (4MCA) using the native redox partner (Mbr); two-component system and non-physiological redox partners (Pdr/Pdx); three-component system. The catalytic efficiency for -demethylation of 4 MB using Mbr and Pdr/Pdx was 0.02 ± 0.006 min μM and 0.07 ± 0.02 min μM respectively. Further, sequence annotation and function prediction by RAST and KEEG analysis revealed a complete catabolic pathway for the utilization of 4 MB by strain KCCM40447, which was also proved experimentally.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10838780PMC
http://dx.doi.org/10.1016/j.heliyon.2024.e25083DOI Listing

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