Turing pattern formation on the sphere is robust to the removal of a hole.

J Math Biol

Department of Mathematics and Mathematical Statistics, Umeå University, MIT Building, 3rd Floor Linneaus Väg, 907 36, Umeå, Västerbotten, Sweden.

Published: January 2024

AI Article Synopsis

  • Budding yeast cell membrane formation of buds is influenced by the protein Cdc42 through reactions and diffusion, modeled by the Schnakenberg system of partial differential equations.
  • The Schnakenberg system is known for creating patterns driven by diffusion, but the impact of accumulated bud scars on these patterns is not fully understood.
  • By simulating a bud scar as a hole on a sphere and analyzing how it affects the Laplace-Beltrami operator, researchers found that significant pattern formation persists even with large bud scars, supporting the idea that bud formation relies on diffusion-driven instability.

Article Abstract

The formation of buds on the cell membrane of budding yeast cells is thought to be driven by reactions and diffusion involving the protein Cdc42. These processes can be described by a coupled system of partial differential equations known as the Schnakenberg system. The Schnakenberg system is known to exhibit diffusion-driven pattern formation, thus providing a mechanism for bud formation. However, it is not known how the accumulation of bud scars on the cell membrane affect the ability of the Schnakenberg system to form patterns. We have approached this problem by modelling a bud scar on the cell membrane with a hole on the sphere. We have studied how the spectrum of the Laplace-Beltrami operator, which determines the resulting pattern, is affected by the size of the hole, and by numerically solving the Schnakenberg system on a sphere with a hole using the finite element method. Both theoretical predictions and numerical solutions show that pattern formation is robust to the introduction of a bud scar of considerable size, which lends credence to the hypothesis that bud formation is driven by diffusion-driven instability.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10830788PMC
http://dx.doi.org/10.1007/s00285-023-02034-zDOI Listing

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