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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock. | LitMetric

AI Article Synopsis

  • * Four new Antarctic cyanobacteria metagenome-assembled genomes (MAGs) were identified from microbial mats in Lake Vanda, classified as sp. BulkMat.35, MP8IB2.15, sp. MP8IB2.171, and MP9P1.79, with genome sizes ranging from 2.76 Mbp to 6.07 Mbp.
  • * Analysis indicates these new MAGs are genetically distinct from existing polar cyanobacteria, containing genes for cold tolerance and circadian rhythm, emphasizing the need for further genomic research

Article Abstract

Cyanobacteria in polar environments face environmental challenges, including cold temperatures and extreme light seasonality with small diurnal variation, which has implications for polar circadian clocks. However, polar cyanobacteria remain underrepresented in available genomic data, and there are limited opportunities to study their genetic adaptations to these challenges. This paper presents four new Antarctic cyanobacteria metagenome-assembled genomes (MAGs) from microbial mats in Lake Vanda in the McMurdo Dry Valleys in Antarctica. The four MAGs were classified as sp. BulkMat.35, MP8IB2.15, sp. MP8IB2.171, and MP9P1.79. The MAGs contain 2.76 Mbp - 6.07 Mbp, and the bin completion ranges from 74.2-92.57%. Furthermore, the four cyanobacteria MAGs have average nucleotide identities (ANIs) under 90% with each other and under 77% with six existing polar cyanobacteria MAGs and genomes. This suggests that they are novel cyanobacteria and demonstrates that polar cyanobacteria genomes are underrepresented in reference databases and there is continued need for genome sequencing of polar cyanobacteria. Analyses of the four novel and six existing polar cyanobacteria MAGs and genomes demonstrate they have genes coding for various cold tolerance mechanisms and most standard circadian rhythm genes with the sp. BulkMat.35 and MP9P1.79 contained , a divergent homolog of .

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10812107PMC
http://dx.doi.org/10.3389/fmicb.2023.1330602DOI Listing

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