AI Article Synopsis

  • The Ovate Family Proteins (OFPs) gene family plays a crucial role in regulating plant growth and development, with a study analyzing 256 OFP protein sequences across Brassica.
  • The analysis revealed that OFPs are sensitive to light, interact with transcription factors to regulate gene expression, and show specific expression patterns under various stress conditions.
  • Findings highlight the significant impact of OFPs on plant development and stress responses, paving the way for future research on their functional roles in Brassica and other plants.

Article Abstract

The Ovate Family Proteins (OFPs) gene family houses a class of proteins that are involved in regulating plant growth and development. To date, there is no report of the simultaneous functional characterization of this gene family in all members of U's Triangle of Brassica. Here, we retrieved a combined total of 256 OFP protein sequences and analyzed their chromosomal localization, gene structure, conserved protein motif domains, and the pattern of cis-acting regulatory elements. The abundance of light-responsive elements like G-box, MRE, and GT1 motif suggests that OFPs are sensitive to the stimuli of light. The protein-protein interaction network analysis revealed that OFP05 and its orthologous genes were involved in regulating the process of transcriptional repression through their interaction with homeodomain transcription factors like KNAT and BLH. The presence of domains like DNA binding 2 and its superfamily speculated the involvement of OFPs in regulating gene expression. The biotic and abiotic stress, and the tissue-specific expression analysis of the RNA-seq datasets revealed that some of the genes such as BjuOFP30, and BnaOFP27, BolOFP11, and BolOFP10 were highly upregulated in seed coat at the mature stage and roots under various chemical stress conditions respectively which suggests their crucial role in plant growth and development processes. Experimental validation of prominent BnaOFPs such as BnaOFP27 confirmed their involvement in regulating gene expression under salinity, heavy metal, drought, heat, and cold stress. The GO and KEGG pathway enrichment analysis also sheds light on the involvement of OFPs in regulating plant growth and development. These findings have the potential to serve as a forerunner for future studies in terms of functionally diverse analysis of the OFP gene family in Brassica and other plant species.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10817133PMC
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0297473PLOS

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