First Report of Causing Rice Spikelet Rot Disease in China.

In September 2022, rice spikelets rot disease (RSRD) was investigated in Songjiang District (30.94132N, 121.18393E), China, leading to a 26.77% yield loss. At the heading stage, infected spikelets exhibited small, yellowish-brown dots with water-stained husks, subsequently coalescing to form irregular brown to black lesions. Later, the lesions were enlarged and rotted, which eventually caused blighted grains. About 10% of husked grains showed black spots. 30 infected grains and 30 husked grains with black spots were surface sterilized in 75% ethanol for 2 min, then rinsed with ddHO and plated on PDA medium at 28°C in darkness for 4 d. 22 and 13 fungal isolates with similar morphology were obtained in shriveled and husked grains, respectively. Three isolates (SJTU1, SJTU2 and SJTU3) were selected by the single-spore isolation method. The colonies were brown to blackish green, smooth, and contained a large number of stolons with a few aerial mycelia in the center. Hyphae and conidiophores were blackish green, thick-walled, branched with septa. Conidia were 14.77 to 26.82×4.74 to 11.36 μm (average 20.42×8.58 μm, n= 100) in size, lightly curved with blackish green. Conidia with three septa and four cells, apical and basal cells transparent, middle cell unequal in size. Based on morphological characteristics, the isolates were preliminarily identified as (Raza et al. 2019). The genomic DNA of the three isolates (SJTU1 to 3) was extracted for molecular identification. 3 pairs of primers ITS1/TTS4 (Peever et al. 2004), gpd1/gpd2 (Berbee et al. 1999), and EF-983F/EF-2218R (Rehner and Buckley 2005) were used to amplify ITS, GAPDH, and EF1-α genes, respectively. These sequences were all uploaded in GenBank (ITS: OR726053 to 55; EF1-α: OR732471 to 73; GAPDH: OR732474 to 76). According to data in GenBank, the ITS, EF1-α, and GAPDH genes of 3 isolates (SJTU1 to 3) showed 99-100% identity (573/575 bp, 542/543 bp, and 531/531 bp) to the ITS (MW581905, MN044755, and MN215690), 99-100% identity (869/869 bp, 868/869 bp, and 855/856 bp) to the EF1-α (MN263982 to 83, and MT628901), and 99-100% identity (543/544 bp, 528/528 bp, and 540/540 bp) to the GAPDH (MT628902, MN264120, and MT432926) gene of , respectively. The phylogenetic analysis by Maximum Likelihood (ML) method based on the concatenated sequences of ITS, EF1-α, and GAPDH genes showed that the three isolates (SJTU1 to 3) clustered with . According to morphology and molecular identification, these fungal isolates were identified as . Pathogenicity tests were conducted in the field used only for inoculation with pathogens by spraying 30 spikelets of rice cultivar 'Song1013' at the heading stage with conidial suspension (5 × 10 conidia/mL). 30 spikelets sprayed with ddHO were designated as control. The test was conducted 3 times at 22 to 31°C with 78 to 89% RH. All the inoculated spikelets exhibited similar symptoms to those of the infected spikelets in paddy at 10 d after spraying, while the control spikelets remained healthy. All reisolated strains from infected spikelets were identified the same as the original inoculated strains by morphology and ITS sequences, fulfilling Koch's postulates. To our knowledge, this is the first report of causing RSRD in China. The discovery of this new disease and its pathogens will facilitate the provision of pathogenically relevant information vital for management strategies to RSRD caused by in the future.