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Simulation of the emergence of cell-like morphologies with evolutionary potential based on virtual molecular interactions. | LitMetric

Simulation of the emergence of cell-like morphologies with evolutionary potential based on virtual molecular interactions.

Sci Rep

Department of Ocean Mechanical Engineering, National Fisheries University, 2-7-1, Nagata-Honmachi, Shimonoseki, Yamaguchi, 759-6595, Japan.

Published: January 2024

This study explored the emergence of life using a simulation model approach. The "multiset chemical lattice model" allows the placement of virtual molecules of multiple types in each lattice cell in a two-dimensional space. This model was capable of describing a wide variety of states and interactions, such as the diffusion, chemical reaction, and polymerization of virtual molecules, in a limited number of lattice cell spaces. Moreover, this model was capable of describing a wide variety of states and interactions, even in the limited lattice cell space of 100 × 100 cells. In this study, I assumed 18 types of virtual molecules, i.e., 18 virtual numbers that do not correspond to real molecules with chemical reactions represented by transformation of the numbers that occur with a specified reaction rate probability. Furthermore, it considered the energy metabolism and energy resources in the environment, and was able to reproduce "evolution," in which a certain cell-like shape that adapted to the environment survived under conditions of decreasing amounts of energy resources in the environment. This enabled the simulation of the emergence of cell-like shapes with the four minimum cellular requirements, i.e., boundary, metabolism, replication, and evolution, based solely on the interaction of virtual molecules.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10808344PMC
http://dx.doi.org/10.1038/s41598-024-52475-9DOI Listing

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