A convenient assay for soluble Dectin-1 lectin domain binding to insoluble β-glucans.

Carbohydr Res

Division of Structural Glycobiology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, 4-4-1 Komatsushima, Aoba-ku, Sendai, Miyagi, 981-8558, Japan. Electronic address:

Published: February 2024

β-Glucan is a homopolymer with a backbone of β-1,3-linked glucose residues. The solubility and biological activity of β-glucan can be influenced by the length of the backbone and the length/interval of the β-1,6 branches. Dectin-1 is crucial in innate immunity through its binding to exogenous β-glucans. However, there are few quantitative binding affinities available and there is no comprehensive comparative analysis of the binding of Dectin-1 to insoluble β-glucans. Here, we have developed a simple binding assay for the interaction between Dectin-1 lectin domain (Dectin-1 CTLD) and insoluble β-glucans. We utilized the paramylon particle as a model of insoluble β-glucans. Dectin-1 CTLD bound to paramylon (particle size 3.1 μm) was separated from unbound Dectin-1 CTLD by centrifugation using a membrane filter (pore size 0.2 μm). The protein in the filtrate was quantified by SDS-PAGE and densitometry. The amount decreased in proportion to the amount of paramylon in the mixture. A control experiment using the Dectin-1 CTLD inactive mutant W221A showed that the mutant passes through the filter without binding paramylon. These results are evidence of site-specific binding of Dectin-1 CTLD to paramylon and demonstrate that the separation of paramylon-bound/unbound Dectin-1 CTLD is achievable through centrifugation using a filter. The assay was extended to other insoluble β-glucans including curdlan. Additionally, it can be utilized in competitive inhibition experiments with soluble short-chain β-glucans such as laminarin. The assay system allows for quantitative comparison of the affinities between insoluble and soluble β-glucans and Dectin-1 CTLD, and should be useful because of its low-tech convenience.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.carres.2024.109041DOI Listing

Publication Analysis

Top Keywords

dectin-1 ctld
28
insoluble β-glucans
20
dectin-1
11
dectin-1 lectin
8
lectin domain
8
β-glucans
8
binding dectin-1
8
paramylon particle
8
β-glucans dectin-1
8
binding
7

Similar Publications

The Dectin-1 and Dectin-2 clusters: C-type lectin receptors with fundamental roles in immunity.

EMBO Rep

December 2024

Medical Research Council (MRC) Centre for Medical Mycology, University of Exeter, Exeter, UK.

Article Synopsis
  • Myeloid cells use transmembrane protein receptors to identify and distinguish between different types of ligands, playing a vital role in immune responses.
  • C-type lectin receptors (CLRs), particularly Dectin-1 and Dectin-2, have a key structural motif called the C-type lectin-like domain (CTLD) that allows them to recognize a variety of biological molecules, including glycans, proteins, and lipids.
  • This review focuses on the latest findings related to the expression, signaling pathways, and immune functions of Dectin clusters, emphasizing their critical roles in immune cell activity.
View Article and Find Full Text PDF

A convenient assay for soluble Dectin-1 lectin domain binding to insoluble β-glucans.

Carbohydr Res

February 2024

Division of Structural Glycobiology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, 4-4-1 Komatsushima, Aoba-ku, Sendai, Miyagi, 981-8558, Japan. Electronic address:

β-Glucan is a homopolymer with a backbone of β-1,3-linked glucose residues. The solubility and biological activity of β-glucan can be influenced by the length of the backbone and the length/interval of the β-1,6 branches. Dectin-1 is crucial in innate immunity through its binding to exogenous β-glucans.

View Article and Find Full Text PDF

Molecular dynamic simulation: Study on the recognition mechanism of linear β-(1 → 3)-D-glucan by Dectin-1.

Carbohydr Polym

June 2022

State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, PR China; School of Applied Chemistry and Engineering, University of Science and Technology of China, Hefei 230026, PR China.

By combining molecular dynamic (MD) simulation and docking techniques, we systematically investigated the recognition between linear β-(1 → 3)-glucan (bglc) and Dectin-1. The binding structure exhibits apparent endo-type recognition between the C-type lectin-like domain (CTLD) groove formed by Trp221, His223, Tyr228, as well as other residues around them, and the conformational patterns of triple-helix bglc. Trp221, His223, and Tyr228 play an important role in stabilizing the recognition complex through forming a simple but fixed hydrogen bond network with the C and C hydroxyls.

View Article and Find Full Text PDF

Immune-modulatory effects of β-glucans are generally considered beneficial to fish health. Despite the frequent application of β-glucans in aquaculture practice, the exact receptors and downstream signalling remains to be described for fish. In mammals, Dectin-1 is a member of the C-type lectin receptor (CLR) family and the best-described receptor for β-glucans.

View Article and Find Full Text PDF

β-Glucan-induced cooperative oligomerization of Dectin-1 C-type lectin-like domain.

Glycobiology

August 2018

Structural Glycobiology Team, Systems Glycobiology Research Group, RIKEN Global Research Cluster, 2-1 Hirosawa, Wako, Saitama, Japan.

Dectin-1 is a C-type lectin-like pattern recognition receptor that recognizes β(1-3)-glucans present on non-self pathogens. It is of great importance in innate immunity to understand the mechanism whereby Dectin-1 senses β(1-3)-glucans and induces intracellular signaling. In this study, we characterize the ligand binding and ligand-induced oligomerization of murine Dectin-1 using its C-type lectin-like domain (CTLD).

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!