Unraveling the Molecular Basis of Stabilizing Selection by Experimental Evolution.

Genome Biol Evol

Institut für Populationsgenetik, Vetmeduni Vienna, Vienna, Austria.

Published: December 2023

AI Article Synopsis

  • Stabilizing selection is common but hard to identify in genomic data due to overlapping signals with population demographics.
  • Experimental evolution offers a method to explore genomic regions under stabilizing selection pressure, illustrated by a study on Aedes aegypti populations that suggested relaxed stabilizing selection.
  • The study's inability to detect true relaxed stabilizing selection is linked to flawed statistical methods that produced many false positives and the misconception that RNA-mediated knockdown can validate candidate SNPs for complex traits.

Article Abstract

Stabilizing selection provides a challenge to molecular population genetics. Although stabilizing selection is ubiquitous, its genomic signature is difficult to distinguish from demographic signals. Experimental evolution provides a promising approach to characterize genomic regions exposed to stabilizing selection. A recent experimental evolution study of Aedes aegypti populations evolving either with or without sexual selection found a pattern of genetic differentiation suggestive of relaxed stabilizing selection. I argue that this study could not have detected the signal of relaxed stabilizing selection. I highlight why incorrect statistical methods resulted in a high number of false positive candidate single nucleotide polymorphism (SNPs) and discuss the fallacy of functional validation of candidate SNPs for polygenic traits by RNA-mediated knockdown.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10718812PMC
http://dx.doi.org/10.1093/gbe/evad220DOI Listing

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