An oncogenic phenoscape of colonic stem cell polarization.

Cell

Cell Communication Lab, Department of Oncology, University College London Cancer Institute, 72 Huntley Street, London WC1E 6DD, UK. Electronic address:

Published: December 2023

AI Article Synopsis

  • - The study investigates how cancer cells in colonic organoids are influenced by both genetic mutations (oncogenes) and their surrounding environment, particularly focusing on the roles of different cell types like fibroblasts and macrophages.
  • - Researchers conducted a detailed analysis that showed a stepwise differentiation process among cancer stem cells, highlighting that specific combinations of mutations and external signals determine whether these cells become regenerative (revCSCs) or hyper-proliferative (proCSCs).
  • - Findings suggest that the loss of the APC gene and mutations in KRAS disrupt normal communication between stromal and epithelial cells, leading to a dominance of oncogenic signals that hinder typical cell differentiation processes.

Article Abstract

Cancer cells are regulated by oncogenic mutations and microenvironmental signals, yet these processes are often studied separately. To functionally map how cell-intrinsic and cell-extrinsic cues co-regulate cell fate, we performed a systematic single-cell analysis of 1,107 colonic organoid cultures regulated by (1) colorectal cancer (CRC) oncogenic mutations, (2) microenvironmental fibroblasts and macrophages, (3) stromal ligands, and (4) signaling inhibitors. Multiplexed single-cell analysis revealed a stepwise epithelial differentiation phenoscape dictated by combinations of oncogenes and stromal ligands, spanning from fibroblast-induced Clusterin (CLU) revival colonic stem cells (revCSCs) to oncogene-driven LRIG1 hyper-proliferative CSCs (proCSCs). The transition from revCSCs to proCSCs is regulated by decreasing WNT3A and TGF-β-driven YAP signaling and increasing KRAS or stromal EGF/Epiregulin-activated MAPK/PI3K flux. We find that APC loss and KRAS collaboratively limit access to revCSCs and disrupt stromal-epithelial communication-trapping epithelia in the proCSC fate. These results reveal that oncogenic mutations dominate homeostatic differentiation by obstructing cell-extrinsic regulation of cell-fate plasticity.

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http://dx.doi.org/10.1016/j.cell.2023.11.004DOI Listing

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