Enzymes play crucial roles in life sciences, pharmaceuticals and industries as biological catalysts that speed up biochemical reactions in living organisms. New catalytic reactions are continuously developed by enzymatic engineering to meet industrial needs, which thereby drives the development of analytical approaches for real-time reaction monitoring to reveal catalytic processes. Here, taking the hydrolase- chymotrypsin as a model system, we proposed a convenient method for monitoring catalytic processes through native top-down mass spectrometry (native TDMS). The chymotrypsin sample heterogeneity was first explored. By altering sample introduction modes and pHs, covalent and noncovalent enzymatic complexes, substrates and products can be monitored during the catalysis and further confirmed by tandem MS. Our results demonstrated that native TDMS based catalysis monitoring has distinctive strength on real-time inspection and continuous observation, making it a promising tool for characterizing more biocatalysts.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1016/j.aca.2023.341971 | DOI Listing |
J Am Soc Mass Spectrom
December 2024
Institute of Organic Chemistry and Center for Molecular Biosciences Innsbruck (CMBI), University of Innsbruck, 6020 Innsbruck, Austria.
Top-down mass spectrometry (MS) enables comprehensive characterization of modified proteins and nucleic acids and, when native electrospray ionization (ESI) is used, binding site mapping of their complexes with native or therapeutic ligands. However, the high complexity of top-down MS spectra poses a serious challenge to both manual and automated data interpretation, even when the protein, RNA, or DNA sequence and the type of modification or the ligand are known. Here, we introduce FAST MS, a user-friendly software that identifies, assigns and relatively quantifies signals of molecular and fragment ions in MS and MS/MS spectra of biopolymers with known sequence and provides a toolbox for statistical analysis.
View Article and Find Full Text PDFBrain Lang
January 2025
Basque Center on Cognition, Brain and Language, San Sebastian, Spain; University School of Medicine, 291 Campus Drive, Li Ka Shing Building, Stanford, CA 94305 5101, USA; Stanford University Graduate School of Education, 485 Lasuen Mall, Stanford, CA 94305, USA; University of Modena and Reggio Emilia, Via Campi 287, 41125 Modena, Italy.
Previous studies indicate differences in native and foreign speech processing (Lev-Ari, 2018), with mixed evidence for differences between dialectal and foreign accent processing (Adank, Evans, Stuart-Smith, & Scott, 2009; Floccia et al., 2006, 2009; Girard, Floccia, & Goslin, 2008). Two theories have been proposed: The Perceptual Distance Hypothesis suggests that dialectal accent processing is an attenuated version of foreign accent processing (Clarke & Garrett, 2004), while the Different Processes Hypothesis argues that foreign and dialectal accents are processed via distinct mechanisms (Floccia, Butler, Girard, & Goslin, 2009).
View Article and Find Full Text PDFOecologia
December 2024
Department of Biology, University of Central Florida, Orlando, FL, USA.
Global change drivers such as habitat fragmentation, species invasion, and climate warming can act synergistically upon native systems; however, global change drivers can be neutralized if they induce antagonistic interactions in ecological communities. Deadwood comprises a considerable portion of forest carbon, and it functions as refuge, nesting habitat and nutrient source for plant, animal and microbial communities. We predicted that thermophilic termites would increase wood decomposition with experimental warming and in forest edge habitat.
View Article and Find Full Text PDFConserv Biol
December 2024
ProFEB/GIZ, Provincial Forest Inspection Office, Thakhek, Laos.
Free, prior, and informed consent (FPIC) is now a globally established norm and is a condition of equitable engagement with Indigenous peoples and local communities in biodiversity conservation. However, implementation is frequently questioned in terms of its efficacy in top-down-driven governance contexts. Local officials represent core voices often absent from mainstream discourse.
View Article and Find Full Text PDFCarbohydr Polym
January 2025
Division of Glycoscience, Department of Chemistry, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, AlbaNova University Centre, SE-106 91 Stockholm, Sweden. Electronic address:
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!