AI Article Synopsis

  • Developed a computational procedure to create and validate predictive models for estimating the biological activity of ligands using machine learning methods and experimental data.
  • Thoroughly explored different methods and chemical features to enhance model performance, leading to effective virtual screening of the ZINC20 database.
  • Successfully identified two candidate ligands for ROR receptors, with one confirmed to induce biological activity, demonstrating the effectiveness of the methodology.

Article Abstract

In this work, we developed and applied a computational procedure for creating and validating predictive models capable of estimating the biological activity of ligands. The combination of modern machine learning methods, experimental data, and the appropriate setup of molecular descriptors led to a set of well-performing models. We thoroughly inspected both the methodological space and various possibilities for creating a chemical feature space. The resulting models were applied to the virtual screening of the ZINC20 database to identify new, biologically active ligands of ROR receptors, which are a subfamily of nuclear receptors. Based on the known ligands of ROR, we selected candidates and calculate their predicted activities with the best-performing models. We chose two candidates that were experimentally verified. One of these candidates was confirmed to induce the biological activity of the ROR receptors, which we consider proof of the efficacy of the proposed methodology.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663739PMC
http://dx.doi.org/10.1016/j.csbj.2023.10.021DOI Listing

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