Chemical chaperones are low-molecular-weight compounds that suppress protein aggregation. They can influence different stages of the aggregation process-the stage of protein denaturation, the nucleation stage and the stage of aggregate growth-and this may lead to a change in the aggregation kinetic regime. Here, the possibility of changing the kinetic regime in the presence of a chemical chaperone 2-hydroxypropyl-β-cyclodextrin (2-HP-β-CD) was investigated for a test system based on the thermally induced aggregation of yeast alcohol dehydrogenase (yADH) at 56 °C. According to differential scanning calorimetry data, 2-HP-β-CD did not affect the stage of the protein molecule unfolding. Dynamic light scattering data indicated changes in the aggregation kinetics of yADH during the nucleation and aggregate growth stages in the presence of the chaperone. The analysis of kinetic curves showed that the order of aggregation with respect to protein (), calculated for the stage of aggregate growth, changed from = 1 to = 2 with the addition of 100 mM 2-HP-β-CD. The mechanism of 2-HP-β-CD action on the yADH thermal aggregation leading to a change in its kinetic regime of aggregation is discussed.
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http://dx.doi.org/10.3390/ijms242216140 | DOI Listing |
Phys Chem Chem Phys
January 2025
Department of Chemistry, Hankuk University of Foreign Studies, Yongin 17035, Republic of Korea.
In our previous work, we studied the thermodynamics of two cases of intercompartmental transport through a carbon nanotube: one involving water molecules and the other involving nonpolar molecules. Free energy calculations indicate that transporting water molecules from one compartment to another a narrow channel is impossible, whereas for nonpolar molecules, only approximately half can be transported. Therefore, the interaction strength between transported molecules significantly affects molecular transport.
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January 2025
Materials Science and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Trivandrum 695 019, Kerala, India.
Lightweight flexible piezoelectric devices have garnered significant interest over the past few decades due to their applications as energy harvesters and wearable sensors. Among different piezoelectrically active polymers, poly(vinylidene fluoride) and its copolymers have attracted considerable attention for energy conversion due to their high flexibility, thermal stability, and biocompatibility. However, the orientation of polymer chains for self-poling under mild conditions is still a challenging task.
View Article and Find Full Text PDFChaos
January 2025
Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781039, Assam, India.
Spirals are a special class of excitable waves that have its significance in the understanding of cardiac arrests and neuronal transduction. In a theoretical model of the chemical Belousov-Zhabotinsky reaction system, we explore the dynamics of the spatiotemporal patterns that emerge out of competing reaction and diffusion phenomena. By modifying the existing mathematical models of the reaction kinetics, we have been able to explore the explicit effect of hydrogen ion concentration in the system, so as to achieve various regimes of wave activity, from stable spirals to oscillation death.
View Article and Find Full Text PDFPhys Chem Chem Phys
January 2025
Institute of Solid State Chemistry and Mechanochemistry SB RAS, 18 Kutateladze st., Novosibirsk 630090, Russian Federation.
This work investigates the solid-state reaction between iridium and zirconium carbide, resulting in the formation of carbon and ZrIr-an intermetallic compound of great interest for modern high-temperature materials science. We have found a transition of kinetic regimes in this reaction: from linear kinetics (when the chemical reaction is a limiting stage) at 1500 and 1550 °C to 'non-parabolic kinetics' at 1600 °C. Non-parabolic kinetics is characterized by the thickness of the product layer being proportional to a power of time less than 1/2.
View Article and Find Full Text PDFProtein Sci
February 2025
Amherst College, Amherst, Massachusetts, USA.
Hydrogen exchange mass spectrometry (HXMS) is a powerful tool to understand protein folding pathways and energetics. However, HXMS experiments to date have used exchange conditions termed EX1 or EX2 which limit the information that can be gained compared to the more general EXX exchange regime. If EXX behavior could be understood and analyzed, a single HXMS timecourse on an intact protein could fully map its folding landscape without requiring denaturation.
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