We investigate the first direct proton abstraction reactions from reducing agents () hydrazine and diethyl hydroxylamine (DEHA), toward dioxygen (O) in the aqueous phase, spanning ambient to high-temperature conditions. Quantum chemistry methods and molecular dynamics simulations are employed in this study. Quantum chemistry methods are used to analyze the quasi-equilibrium between a reactive conformation and a transition state in the [,O] cluster. On the other hand, molecular dynamics simulations estimate the probability of observing a reactive conformation of the [,O] cluster in the solution. In this study, we assume that the energy barrier of the quasi-equilibrium is sufficiently high for the /O association process to be at equilibrium. Our findings indicate that the first proton abstraction process from a reactive conformation cluster by DEHA is energetically favored compared to hydrazine. Conversely, the association process of hydrazine and O in solution is more favorable than that of DEHA. Consequently, the rate constant for the first proton abstraction process is similar for both hydrazine and DEHA, particularly at high temperatures, with activation energies of approximately 21.5 ± 1.5 kcal mol for both compounds. These results align with recent experiments investigating the complete O scavenger process in liquid water with hydrazine and DEHA. Therefore, our findings support the assumption that first proton abstraction reactions are the rate-determining steps in O scavenger processes in the aqueous phase.
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http://dx.doi.org/10.1021/acs.jpca.3c05383 | DOI Listing |
Korean J Gastroenterol
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Hanmi Pharmaceutical Co., Ltd., Seoul, Korea.
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Zhonghua Kou Qiang Yi Xue Za Zhi
January 2025
Department of Stomatology, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology & School of Stomatology, Tongji Medical College, Huazhong University of Science and Technology & Hubei Province Key Laboratory of Oral and Maxillofacial Development and Regeneration, Wuhan 430022, China.
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View Article and Find Full Text PDFSe Pu
February 2025
School of Chemistry and Chemical Engineering, Guangxi University, Nanning 530004, China.
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January 2025
Department of Computational Chemistry, Lund University, Chemical Centre, P. O. Box 124, SE-221 00 Lund, Sweden.
Particulate methane monooxygenase (pMMO) is the most efficient of the two groups of enzymes that can hydroxylate methane. The enzyme is membrane bound and therefore hard to study experimentally. For that reason, there is still no consensus regarding the location and nature of the active site.
View Article and Find Full Text PDFBiochemistry
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Department of Biochemistry and Molecular Biology, Dalhousie University, Halifax, NS B3H 4R2, Canada.
Enzymes of the enolase superfamily (ENS) are mechanistically diverse, yet share a common partial reaction, i.e., the metal-assisted, Bro̷nsted base-catalyzed abstraction of the α-proton from a carboxylate substrate to form an enol(ate) intermediate.
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