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The role of the early-life gut microbiome in childhood asthma.
Gut Microbes
December 2025
Copenhagen Prospective Studies on Asthma in Childhood, Copenhagen University Hospital, Herlev-Gentofte, Gentofte, Denmark.
Asthma is a chronic disease affecting millions of children worldwide, and in severe cases requires hospitalization. The etiology of asthma is multifactorial, caused by both genetic and environmental factors. In recent years, the role of the early-life gut microbiome in relation to asthma has become apparent, supported by an increasing number of population studies, research, and intervention trials.
View Article and Find Full Text PDFSARS-CoV-2 CoCoPUTs: analyzing GISAID and NCBI data to obtain codon statistics, mutations, and free energy over a multiyear period.
Virus Evol
January 2025
Hemostasis Branch 1, Division of Hemostasis, Office of Plasma Protein Therapeutics CMC, Office of Therapeutic Products, Center for Biologics Evaluation and Research, Food and Drug Administration, 10903 New Hampshire Ave, Silver Spring, MD 20993, USA.
A consistent area of interest since the beginning of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic has been the sequence composition of the virus and how it has changed over time. Many resources have been developed for the storage and analysis of SARS-CoV-2 data, such as GISAID (Global Initiative on Sharing All Influenza Data), NCBI, Nextstrain, and outbreak.info.
View Article and Find Full Text PDFDeveloping a ceRNA-based lncRNA-miRNA-mRNA regulatory network to uncover roles in skeletal muscle development.
Front Bioinform
January 2025
Department of Biology and Chemistry, College of Sciences, National University of Defense Technology, Changsha, Hunan, China.
The precise role of lncRNAs in skeletal muscle development and atrophy remain elusive. We conducted a bioinformatic analysis of 26 GEO datasets from mouse studies, encompassing embryonic development, postnatal growth, regeneration, cell proliferation, and differentiation, using R and relevant packages (limma et al.).
View Article and Find Full Text PDFElusive modes of Foxp3 activity in versatile regulatory T cells.
Front Immunol
January 2025
Department of Immunology, St. Jude Children's Research Hospital, Memphis, TN, United States.
Foxp3-expressing CD4 regulatory T (Treg) cells play a crucial role in suppressing autoimmunity, tolerating food antigens and commensal microbiota, and maintaining tissue integrity. These multifaceted functions are guided by environmental cues through interconnected signaling pathways. Traditionally, Treg fate and function were believed to be statically determined by the forkhead box protein Foxp3 that directly binds to DNA.
View Article and Find Full Text PDFThe AWC neuron is important for attraction to 1-butanol in .
MicroPubl Biol
January 2025
Department of Neuroscience, Pomona College, Claremont, California, United States of America.
uses chemosensation to recognize a variety of odors, many of which are released by bacteria, the major food source of . Specific amphid sensory neurons are known to detect different odorants. Here we show that the AWC neuron detects the attractive odorant 1-butanol.
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