Quantifying Soil Complexity Using Fisher Shannon Method on 3D X-ray Computed Tomography Scans.

Entropy (Basel)

Departamento de Estatística e Informática, Universidade Federal Rural de Pernambuco, Rua Dom Manoel de Medeiros s/n, Dois Irmãos, Recife 52171-900, PE, Brazil.

Published: October 2023

The conversion of native forest into agricultural land, which is common in many parts of the world, poses important questions regarding soil degradation, demanding further efforts to better understand the effect of land use change on soil functions. With the advent of 3D computed tomography techniques and computing power, new methods are becoming available to address this question. In this direction, in the current work we implement a modification of the Fisher-Shannon method, borrowed from information theory, to quantify the complexity of twelve 3D CT soil samples from a sugarcane plantation and twelve samples from a nearby native Atlantic forest in northeastern Brazil. The distinction found between the samples from the sugar plantation and the Atlantic forest site is quite pronounced. The results at the level of 91.7% accuracy were obtained considering the complexity in the Fisher-Shannon plane. Atlantic forest samples are found to be generally more complex than those from the sugar plantation.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10606068PMC
http://dx.doi.org/10.3390/e25101465DOI Listing

Publication Analysis

Top Keywords

atlantic forest
12
computed tomography
8
sugar plantation
8
quantifying soil
4
soil complexity
4
complexity fisher
4
fisher shannon
4
shannon method
4
method x-ray
4
x-ray computed
4

Similar Publications

Road activities are recognized sources of pollution that affect the hydrochemistry of nearby water bodies. This study evaluated the Water Quality Monitoring Program in the Soberbo and Iconha rivers in the Guapi-Macacu watershed, which is affected by the BR-116 highway. The Rio-Teresópolis Concessionaire from 2009 to 2016 carried out quarterly sampling.

View Article and Find Full Text PDF

This study aims to enhance our understanding of the temporal and spatial processes scales governing the evolutionary diversification of Neotropical birds with Trans- and Cis-Andean populations of the species from South and Central America. Through a multilocus analysis of the mitochondrial (CytB and ND2) and nuclear genes (I7BF, I5BF, and G3PDH) of 41 samples representing six subspecies, we describe the existing molecular lineages of , and estimate their demographic dynamics. We used Ecological Niche Modeling (ENM) with six different algorithms to predict the potential distribution of in both present-day and past scenarios, examining the overlap climatic niche between Cis- and Trans-Andean lineages.

View Article and Find Full Text PDF

The two main extensions of rain forest in South America are the Amazon (Amazônia) and the Atlantic rain forest (Mata Atlântica), which are separated by a wide 'dry diagonal' of seasonal vegetation. We used the species-rich tree genus to test if Amazônia-Mata Atlântica dispersals have been clustered during specific time periods corresponding to past, humid climates. We performed hybrid capture DNA sequencing of 810 nuclear loci for 453 accessions representing 164 species that included 62% of Mata Atlântica species and estimated a dated phylogeny for all accessions using maximum likelihood, and a species-level tree using coalescent methods.

View Article and Find Full Text PDF

Growth-tolerance tradeoffs shape the survival outcomes and ecophysiological strategies of Atlantic Forest species in the rehabilitation of mining-impacted sites.

Sci Total Environ

January 2025

Departamento de Botânica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Avenida Antônio Carlos, 6627, Pampulha, Belo Horizonte, Minas Gerais 31270-901, Brazil. Electronic address:

The initial performance of seedlings of tree species from different functional groups, regarding the growth-defense tradeoff, might determine its long-term success during the rehabilitation of mining areas. We monitored the field performance of six native tree species of the Atlantic Forest in the Fundão dam tailing that has been under rehabilitation for 35 months. Additionally, we explored the morphophysiological traits driving the superior performance of three species.

View Article and Find Full Text PDF

Endophytic species from Brazil.

Fungal Syst Evol

December 2024

Departamento de Micologia Prof. Chaves Batista, Universidade Federal de Pernambuco, Av. Prof. Moraes Rego, s/n, Centro de Biociências, Cidade Universitária, CEP: 50670-901, Recife, PE, Brazil.

species can inhabit various hosts with different lifestyles and live as endophytes, pathogens, and saprobes. Our study analysed 180 endophytic isolates from sp. in the Atlantic Forest, in the Brazilian savanna (Cerrado), and in the Caatinga forest and Cerrado in Brazil.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!