Linnaeus 1755 (Lemon basil) is an essential medicinal species in the genus. Its leaf decoction is traditionally used to treat diabetes, constipation, diarrhea, piles, and dysentery. The essential oils from this species have intense fungicidal activity. The complete chloroplast genome sequence of was assembled from Illumina paired-end sequencing data. The chloroplast genome was 152,460 bp in length, containing a large single copy (LSC) region of 83,459 bp and a small single copy (SSC) region of 17,607 bp, separated by a pair of inverted repeats (IRs) of 25,697 bp. The genome contained 134 unique genes, including 89 protein-coding, 37 tRNA, and eight rRNA genes. Among them, nine genes had a single intron, and two genes contained two introns. The overall GC content of the chloroplast genome was 38%, while the corresponding values of LSC, SSC, and IR regions were 35.8%, 31.7%, and 43.1%, respectively. In the phylogenetic analysis, all the species formed a group closely related to was more closely related to and than the other species of included in this study.
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http://dx.doi.org/10.1080/23802359.2023.2264545 | DOI Listing |
Ecol Evol
January 2025
Faculty of Agriculture and Life Science, Hirosaki University Hirosaki Aomori Japan.
Paper mulberry is a fiber resource for paper making. Washi, a traditional paper in Japan, has been produced from × , a hybrid between and . Elite strains have been vegetatively propagated and distributed within Japan.
View Article and Find Full Text PDFEcol Evol
January 2025
Functional Genomics Research Center, NTT Hi-Tech Institute Nguyen Tat Thanh University Ho Chi Minh City Vietnam.
L. 1754, a thorny deciduous tree of Fabaceae, contains various chemical compounds such as alkaloids, flavonoids, and triterpenoids and exhibits anti-depressant, anti-inflammatory, and antidiabetic activities. However, genomic data of are limited.
View Article and Find Full Text PDFThe genus boasts abundant germplasm resources and comprises numerous species. Among these, medicinal plants of this genus, which have a long history, have garnered attention of scholars. This study sequenced and analyzed the chloroplast genomes of six species of medicinal plants (, , , , , and , respectively) to explore their interspecific relationships.
View Article and Find Full Text PDFMitochondrial DNA B Resour
January 2025
Academy of Agricultural Planning and Engineering, Ministry of Agriculture and Rural Affairs, Beijing, China.
We determined the complete chloroplast genome sequence of S. S. Lai 2004.
View Article and Find Full Text PDFMol Biol Evol
January 2025
Department of Molecular Biology, Max Planck Institute for Biology Tübingen, 72076 Tübingen, Germany.
Plant cells have two major organelles with their own genomes: chloroplasts and mitochondria. While chloroplast genomes tend to be structurally conserved, the mitochondrial genomes of plants, which are much larger than those of animals, are characterized by complex structural variation. We introduce TIPPo, a user-friendly, reference-free assembly tool that uses PacBio high-fidelity long-read data and that does not rely on genomes from related species or nuclear genome information for the assembly of organellar genomes.
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