A novel hyperthermophilic, heterotrophic archaeon, strain YC29, was isolated from a deep-sea hydrothermal vent in the Mid-Okinawa Trough, Japan. Cells of strain YC29 were non-motile, irregular cocci with diameters of 1.2-3.0 µm. The strain was an obligatory fermentative anaerobe capable of growth on complex proteinaceous substrates. Growth was observed between 85 and 100 °C (optimum 90-95 °C), pH 4.9-6.4 (optimum 5.1), and in the presence of 1.4-4.0% (w/v) NaCl (optimum 3.0%). Inorganic carbon was required as a carbon source. Phylogenetic analysis based on the 16S rRNA gene sequence revealed that the isolate was a member of the family Pyrodictiaceae. The genome size was 2.02 Mbp with a G+C content of 49.4%. The maximum values for average nucleotide identity (ANI), average amino acid identity (AAI), and in silico DNA-DNA hybridization (dDDH) value of strain YC29 with relatives were 67.9% (with Pyrodictium abyssi strain AV2), 61.1% (with Pyrodictium occultum strain PL-19), and 33.8% (with Pyrolobus fumarii strain 1A), respectively. Based on the phylogenetic, genomic, and phenotypic characteristics, we propose that strain YC29 represents a novel genus and species, Pyrofollis japonicus gen. nov., sp. (type strain YC29 = DSM 113394 = JCM 39171).
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http://dx.doi.org/10.1007/s00792-023-01316-0 | DOI Listing |
Extremophiles
October 2023
Laboratory of Marine Environmental Microbiology, Division of Applied Biosciences, Graduate School of Agriculture, Kyoto University, Oiwake-Cho, Kitashirakawa, Kyoto, 606-8502, Japan.
A novel hyperthermophilic, heterotrophic archaeon, strain YC29, was isolated from a deep-sea hydrothermal vent in the Mid-Okinawa Trough, Japan. Cells of strain YC29 were non-motile, irregular cocci with diameters of 1.2-3.
View Article and Find Full Text PDFPrep Biochem Biotechnol
January 2024
Biofuels Institute, Jiangsu University, Zhenjiang, China.
Lactic acid bacteria (LAB) are widely exploited in fermented foods and are gaining attention for novel uses due to their safety as biopreservatives. In this study, several organic acid-producing LAB strains were isolated from fermented vegetables for their potential application in fermentation. We identified nine novel strains belonging to four genera and five species, PC1-1, YCI-2 (8), YC1-1-4B, YC1-4 (4), and YC2-9, PC-C1, PC2-1 (F2), PC1A, and sp.
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