Decreased Transition-State Analogue Affinity in Isotopically Heavy MTAN with Increased Catalysis.

Biochemistry

Department of Biochemistry, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, New York 10461, United States.

Published: October 2023

5'-Methylthioadenosine/-adenosylhomocysteine nucleosidase from (MTAN) demonstrated faster chemistry when expressed as an isotopically heavy protein, with H, C, and N replacing the bulk of normal isotopes. The inverse heavy enzyme isotope effect has been attributed to improved enzyme-reactant interactions causing more frequent transition-state formation ( 2021, 118, e2109118118). Transition-state analogues stabilize the transient dynamic geometry of the transition state and inform on transition-state dynamics. Here, a slow-onset, tight-binding transition-state analogue of MTAN is characterized with heavy and light enzymes. Dissociation constants for the initial encounter complex () and for the tightly bound complex after slow-onset inhibition (*) with hexylthio-DADMe-Immucillin-A (HTDIA) gave values for light and heavy MTAN = 52 ± 10 and 85 ± 13 pM and * values = 5.9 ± 0.3 and 10.0 ± 1.2 pM, respectively. HTDIA dissociates from heavy MTAN at 0.063 ± 0.002 min, faster than that from light MTAN at 0.032 ± 0.004 min. These values are consistent with transition-state formation by an improved catalytic site dynamic search and inconsistent with catalytic efficiency proportional to tight binding of the transition state.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10636763PMC
http://dx.doi.org/10.1021/acs.biochem.3c00434DOI Listing

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