Genomic Sequence Resource of , the Causative Pathogen of Pomegranate Pulp Rot Disease.

J Fungi (Basel)

School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou 311300, China.

Published: September 2023

, a prominent pathogen responsible for pomegranate pulp rot disease, inflicts significant damage on L. Besides its pathogenicity, this fungus possesses the potential to produce substantial amounts of red pigments, making it promising for industrial applications. This study presents the genome annotation of field strain Tp-2, isolated from pomegranates. The genome assembly, generated through a combination of Oxford Nanopore and Illumina sequencing reads, yielded a high-quality assembly with 14 contigs, featuring an N50 length of 4,594,200 bp. The complete genome of strain Tp-2 spans 38,354,882 bp, with a GC content of 45.78%. Importantly, the assembly exhibits remarkable integrity, with 98.3% of complete Benchmarking Universal Single-Copy Orthologs validating genome completeness. Genome prediction analysis reveals the presence of 10,380 protein-coding genes. To our knowledge, this study is the first report on the genome sequence of , offering valuable insights into its genetic variation and molecular mechanisms of pigment production.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10533087PMC
http://dx.doi.org/10.3390/jof9090909DOI Listing

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